RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 H0YC42 278 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 SKAP2O75563 359 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 NFICP08651 508 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 MDH1P40925 334 aaKnown RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 EXOSC10Q01780 885 aaKnown RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 E2F7Q96AV8 911 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 CAMKK2Q96RR4 588 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 CELF4Q9BZC1 486 aaKnown RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 MFSD1Q9H3U5 465 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 MTO1Q9Y2Z2 717 aaKnown RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 CBX4O00257 560 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 RBP3P10745 1247 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 MUTP22033 750 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 CLK1P49759 484 aaKnown RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 GEMIN4P57678 1058 aaKnown RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 LRIG3Q6UXM1 1119 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 JAMLQ86YT9 394 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 CENPTQ96BT3 561 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 ZNF333Q96JL9 665 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 FAR2Q96K12 515 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 FICDQ9BVA6 458 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 VPS33BQ9H267 617 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 GBA2Q9HCG7 927 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 FBXO10Q9UK96 956 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 ZNF711Q9Y462 761 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 CNTNAP5Q8WYK1 1306 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 AGRPO00253 132 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 SUPT7LO94864 414 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 ALDH2P05091 517 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 PLD1Q13393 1074 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 CSGALNACT1Q8TDX6 532 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 SLC24A3Q9HC58 644 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 TDRKHQ9Y2W6 561 aaKnown RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 IFRD1O00458 451 aaPredicted RBP13.69□□□□□ -0.22
COL1A1-201ENST00000225964 TSPAN3O60637 253 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 CDH16O75309 829 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 CYP7B1O75881 506 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 RPA1P27694 616 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 DEPDC7Q96QD5 511 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 RUSC1Q9BVN2 902 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 UTP6Q9NYH9 597 aaKnown RBP13.69□□□□□ -0.22
COL1A1-201ENST00000225964 SNX8Q9Y5X2 465 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 IQSEC2Q5JU85 1478 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 MBD5Q9P267 1494 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 CEP152O94986 1710 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 GNG14A0A1W2PPG7 69 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 MAPK1P28482 360 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 AMPD2Q01433 879 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 STK4Q13043 487 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 TUBGCP3Q96CW5 907 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 GPRC5CQ9NQ84 441 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 TLR8Q9NR97 1041 aaKnown RBP13.69□□□□□ -0.22
COL1A1-201ENST00000225964 RAD51CO43502 376 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 SGPL1O95470 568 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 SUPT20HL2P0C7V6 817 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 YWHAQP27348 245 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 SGCGQ13326 291 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 ZNF473Q8WTR7 871 aaKnown RBP13.69□□□□□ -0.22
COL1A1-201ENST00000225964 SERAC1Q96JX3 654 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 NDOR1Q9UHB4 597 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 MGAT4DA6NG13 374 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 POMCP01189 267 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 MSH3P20585 1137 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 B3GALNT2Q8NCR0 500 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 EPN3Q9H201 632 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 RERGLQ9H628 205 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 NT5MQ9NPB1 228 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 USP1O94782 785 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 GSTM1P09488 218 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 KCNJ1P48048 391 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL1A1-201ENST00000225964 HIRAP54198 1017 aaPredicted RBP13.69□□□□□ -0.22
COL1A1-201ENST00000225964 YWHAZP63104 245 aaKnown RBP13.69□□□□□ -0.22
COL1A1-201ENST00000225964 TGM3Q08188 693 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 SHROOM1Q2M3G4 852 aaPredicted RBP13.69□□□□□ -0.22
COL1A1-201ENST00000225964 ZNF280DQ6N043 979 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 SH2D3CQ8N5H7 860 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 CNBD2Q96M20 576 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 WDR24Q96S15 920 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 FBXO28Q9NVF7 368 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 GPATCH2LQ9NWQ4 482 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 USP15Q9Y4E8 981 aaPredicted RBP13.69□□□□□ -0.22
COL1A1-201ENST00000225964 TRPM1Q7Z4N2 1603 aa13.69□□□□□ -0.22
COL1A1-201ENST00000225964 MSH4O15457 936 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 ITGALP20701 1170 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 C16orf62Q7Z3J2 963 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 CYP4Z1Q86W10 505 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 ADGRE3Q9BY15 652 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 MROH8Q9H579 483 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 CCDC134Q9H6E4 229 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 CLTCQ00610 1675 aaKnown RBP13.68□□□□□ -0.22
COL1A1-201ENST00000225964 NBNO60934 754 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 NTSR2O95665 410 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 TMEM253P0C7T8 217 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 FGFR2P21802 821 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 COILP38432 576 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-201ENST00000225964 CAP2P40123 477 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 GCLCP48506 637 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-201ENST00000225964 ALDH9A1P49189 494 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms