RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Fam133bQ9CVI2 245 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tmem53Q9D0Z3 276 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cst12Q9DAN8 128 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tm9sf1Q9DBU0 606 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm27029A2A4P4 543 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Prdm12A2AJ77 365 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slfn8B1ARD8 910 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 F6Y6L6 278 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 5830473C10RikF8VQ07 620 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Bnc1O35914 961 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Atp9aO70228 1047 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Axin2O88566 840 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gsta1P13745 223 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 VcpQ01853 806 aaKnown RBP6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zbtb48Q1H9T6 681 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ppp1r12cQ3UMT1 782 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 DeptorQ570Y9 409 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Dsg1aQ61495 1057 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Nlrp14Q6B966 993 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Psd2Q6P1I6 770 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gsta1Q6P8Q0 223 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zfyve28Q6ZPK7 905 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Q80WR5 230 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slitrk1Q810C1 696 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zdhhc15Q8BGJ0 337 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 SgtaQ8BJU0 315 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ablim1Q8K4G5 861 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tdrd3Q91W18 743 aaKnown RBP6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Dtnbp1Q91WZ8 352 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Fkbp6Q91XW8 327 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tekt2Q922G7 430 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tpgs1Q99MS8 303 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Fam212aQ9CX62 282 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ccdc182Q9D9C6 152 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Rsph9Q9D9V4 276 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm11758A2BEI6 360 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm11757A2BEI8 360 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm11239E9Q5Z9 360 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm11237F2Z3W5 360 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm11238F2Z478 360 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm11236J3QMS7 360 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Anxa8O35640 327 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Atp2a2O55143 1044 aaKnown RBP6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 FlgP11088 336 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gabrb2P63137 512 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Adcy8P97490 1249 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Kmt5aQ2YDW7 349 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Wdr70Q3TWF6 657 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Mif4gdQ3UBZ5 222 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Elf3Q3UPW2 391 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm428Q3UTE2 360 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Abhd15Q5F2F2 459 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Trim38Q5SZ99 471 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 FAM120AQ6A0A9 1112 aaKnown RBP6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Stmnd1Q6P3A1 279 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cypt2Q6P924 180 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 TwistnbQ78WZ7 330 aaKnown RBP6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm5622Q810Q0 167 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Pex5lQ8C437 567 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Kat5Q8CHK4 513 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Mrgprx1Q8CIP3 322 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Lin7aQ8JZS0 233 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ssx2ipQ8VC66 615 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Evi2bQ8VD58 444 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cdk9Q99J95 372 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 CmasQ99KK2 432 aaKnown RBP6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc25a11Q9CR62 314 aaKnown RBP6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 QpctQ9CYK2 362 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Il21rQ9JHX3 529 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Dnajb2Q9QYI5 324 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gadd45gQ9Z111 159 aa6.53□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zfp236S4R299 1847 aa6.52□□□□□ -1.36
Lig4-202ENSMUST00000170033 Btbd35f15A0A087WR44 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f12A0A0A0MQP3 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f9A2BFZ7 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f7A2BHG6 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f19A2CG71 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f10A2CG92 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f3A2CGC2 496 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Lrrc63A6H694 637 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Clrn2B2RVW2 232 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f13B8JKF6 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 DgkiD3YWQ0 1071 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Apol11aE9PZG0 334 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gm4841E9QAA8 417 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f2J3QMS5 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f25J3QMV9 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f6J3QMW9 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f26J3QNK2 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f24J3QNQ5 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f8J3QQ50 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f17L7MU81 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Btbd35f18L7MU83 498 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pold2O35654 469 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tspan6O70401 245 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Hcn4O70507 1186 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Magea6O89010 325 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Enpp1P06802 906 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 PcnaP17918 261 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Art2aP17981 287 aa6.52□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms