RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C MRP10O75012 95 aa5.55□□□□□ -1.52
LSP1YPL004C ADH2P00331 348 aaKnown RBP5.55□□□□□ -1.52
LSP1YPL004C PCL2P25693 308 aa5.55□□□□□ -1.52
LSP1YPL004C ARL3Q02804 198 aa5.55□□□□□ -1.52
LSP1YPL004C ANB1P19211 157 aa5.54□□□□□ -1.52
LSP1YPL004C GSP1P32835 219 aaKnown RBP5.54□□□□□ -1.52
LSP1YPL004C GSP2P32836 220 aaKnown RBP5.54□□□□□ -1.52
LSP1YPL004C AIM29P36154 155 aa5.54□□□□□ -1.52
LSP1YPL004C SVP26P38869 228 aa5.54□□□□□ -1.52
LSP1YPL004C YGL088WP53151 121 aa5.54□□□□□ -1.52
LSP1YPL004C RRT15Q3E811 62 aa5.54□□□□□ -1.52
LSP1YPL004C URM1P40554 99 aaPredicted RBP5.53□□□□□ -1.52
LSP1YPL004C ERV14P53173 138 aa5.53□□□□□ -1.52
LSP1YPL004C YDR042CQ03205 200 aa5.53□□□□□ -1.52
LSP1YPL004C BET5Q03630 159 aa5.53□□□□□ -1.52
LSP1YPL004C PKR1Q03880 122 aaKnown RBP5.53□□□□□ -1.52
LSP1YPL004C HTL1Q9URQ5 78 aa5.53□□□□□ -1.52
LSP1YPL004C YEL008WP40001 126 aa5.52□□□□□ -1.53
LSP1YPL004C TIM11P81449 96 aaPredicted RBP5.52□□□□□ -1.53
LSP1YPL004C YPL229WQ99395 206 aa5.52□□□□□ -1.53
LSP1YPL004C YER134CP40081 178 aa5.51□□□□□ -1.53
LSP1YPL004C RPC10P40422 70 aa5.5□□□□□ -1.53
LSP1YPL004C GIS2P53849 153 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
LSP1YPL004C COA3Q3E7B2 85 aa5.5□□□□□ -1.53
LSP1YPL004C YCL021W-AQ96VH3 125 aa5.5□□□□□ -1.53
LSP1YPL004C ENV10Q99382 181 aa5.5□□□□□ -1.53
LSP1YPL004C RPL27BP0C2H7 136 aaKnown RBP5.49□□□□□ -1.53
LSP1YPL004C HMRA2P0CY13 119 aa5.49□□□□□ -1.53
LSP1YPL004C YBR219CP38317 127 aa5.49□□□□□ -1.53
LSP1YPL004C YAR029WP39549 74 aa5.49□□□□□ -1.53
LSP1YPL004C YER085CP40058 173 aa5.49□□□□□ -1.53
LSP1YPL004C POP3P53833 195 aaPredicted RBP5.49□□□□□ -1.53
LSP1YPL004C YLR112WQ12130 139 aa5.49□□□□□ -1.53
LSP1YPL004C YAR023CD6VPM8 179 aa5.48□□□□□ -1.53
LSP1YPL004C LCL2Q08045 131 aa5.48□□□□□ -1.53
LSP1YPL004C RPL31AP0C2H8 113 aaKnown RBP5.47□□□□□ -1.53
LSP1YPL004C OST3P48439 350 aa5.47□□□□□ -1.53
LSP1YPL004C CUE4Q04201 117 aaPredicted RBP5.47□□□□□ -1.53
LSP1YPL004C TPT1Q12272 230 aaKnown RBP5.46□□□□□ -1.54
LSP1YPL004C CMC2Q3E7A4 109 aa5.46□□□□□ -1.54
LSP1YPL004C YBL081WP38180 368 aaKnown RBP5.45□□□□□ -1.54
LSP1YPL004C YMR103CQ04436 120 aa5.45□□□□□ -1.54
LSP1YPL004C YLR194CQ05777 254 aa5.45□□□□□ -1.54
LSP1YPL004C YMR175W-AQ3E766 64 aa5.45□□□□□ -1.54
LSP1YPL004C YDR034C-AP0C289 58 aa5.44□□□□□ -1.54
LSP1YPL004C APS1P35181 156 aa5.44□□□□□ -1.54
LSP1YPL004C YAL064WP39711 94 aa5.44□□□□□ -1.54
LSP1YPL004C YMR295CQ03559 197 aa5.44□□□□□ -1.54
LSP1YPL004C ATP15P21306 62 aa5.43□□□□□ -1.54
LSP1YPL004C YKL070WP36087 169 aa5.43□□□□□ -1.54
LSP1YPL004C ATP16Q12165 160 aa5.43□□□□□ -1.54
LSP1YPL004C SSS1P35179 80 aa5.42□□□□□ -1.54
LSP1YPL004C PAU16P35994 123 aa5.42□□□□□ -1.54
LSP1YPL004C YAL065CO13511 128 aa5.41□□□□□ -1.54
LSP1YPL004C FYV4P38783 130 aaPredicted RBP5.41□□□□□ -1.54
LSP1YPL004C CIN5P40917 295 aa5.41□□□□□ -1.54
LSP1YPL004C CNL1Q06333 122 aa5.4□□□□□ -1.54
LSP1YPL004C YDL241WQ07738 123 aa5.4□□□□□ -1.54
LSP1YPL004C YLR050CQ12155 161 aaKnown RBP5.4□□□□□ -1.54
LSP1YPL004C DFM1Q12743 341 aaKnown RBP5.4□□□□□ -1.54
LSP1YPL004C YDR029WQ12111 104 aa5.39□□□□□ -1.55
LSP1YPL004C SHU1P38751 150 aa5.38□□□□□ -1.55
LSP1YPL004C COX14P39103 70 aa5.38□□□□□ -1.55
LSP1YPL004C SNA2P56508 79 aa5.38□□□□□ -1.55
LSP1YPL004C AIM11P87275 137 aa5.38□□□□□ -1.55
LSP1YPL004C SEN15Q04675 128 aa5.38□□□□□ -1.55
LSP1YPL004C COA6Q3E846 104 aa5.38□□□□□ -1.55
LSP1YPL004C YIL134C-AQ45U18 67 aa5.38□□□□□ -1.55
LSP1YPL004C YDL022C-AP0C5L6 82 aa5.37□□□□□ -1.55
LSP1YPL004C VTC1P40046 129 aaRIP-Chip data5.37□□□□□ -1.55not detected
LSP1YPL004C MRPL11P36521 249 aaPredicted RBP5.36□□□□□ -1.55
LSP1YPL004C SMP1P38128 452 aa5.36□□□□□ -1.55
LSP1YPL004C TOA2P32774 122 aa5.35□□□□□ -1.55
LSP1YPL004C PEX17P40155 199 aa5.35□□□□□ -1.55
LSP1YPL004C YPL261CQ08976 102 aa5.35□□□□□ -1.55
LSP1YPL004C SEC11P15367 167 aa5.34□□□□□ -1.55
LSP1YPL004C HAC1P41546 238 aa5.34□□□□□ -1.55
LSP1YPL004C PPT2Q12036 173 aa5.34□□□□□ -1.55
LSP1YPL004C QCR8P08525 94 aa5.33□□□□□ -1.56
LSP1YPL004C YKR041WP36134 250 aa5.33□□□□□ -1.56
LSP1YPL004C SCS22Q6Q595 175 aa5.33□□□□□ -1.56
LSP1YPL004C YKL044WP36092 106 aa5.32□□□□□ -1.56
LSP1YPL004C YLR307C-AQ3E825 87 aa5.32□□□□□ -1.56
LSP1YPL004C ADH1P00330 348 aaKnown RBP5.31□□□□□ -1.56
LSP1YPL004C STF1P01098 86 aa5.31□□□□□ -1.56
LSP1YPL004C AQY2P0CD90 149 aa5.31□□□□□ -1.56
LSP1YPL004C RPL18AP0CX49 186 aaKnown RBP5.31□□□□□ -1.56
LSP1YPL004C RPL18BP0CX50 186 aaKnown RBP5.31□□□□□ -1.56
LSP1YPL004C RPL32P38061 130 aaKnown RBP5.31□□□□□ -1.56
LSP1YPL004C PEX22P39718 180 aa5.31□□□□□ -1.56
LSP1YPL004C MRPS12P53732 153 aa5.31□□□□□ -1.56
LSP1YPL004C LCL1Q02786 101 aa5.31□□□□□ -1.56
LSP1YPL004C MRPL44P19956 98 aa5.3□□□□□ -1.56
LSP1YPL004C YGL230CP53074 147 aa5.3□□□□□ -1.56
LSP1YPL004C YGL041C-BQ3E750 60 aa5.3□□□□□ -1.56
LSP1YPL004C MBF1O14467 151 aaKnown RBP5.29□□□□□ -1.56
LSP1YPL004C OXA1P39952 402 aa5.29□□□□□ -1.56
LSP1YPL004C SMD1Q02260 146 aaPredicted RBP5.29□□□□□ -1.56
LSP1YPL004C YEL067CP39978 195 aa5.28□□□□□ -1.56
LSP1YPL004C ECM12O13529 151 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 216.8 ms