RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W GSP1P32835 219 aaKnown RBP7.17□□□□□ -1.26
PRE6YOL038W GSP2P32836 220 aaKnown RBP7.17□□□□□ -1.26
PRE6YOL038W YBR209WP38311 105 aa7.17□□□□□ -1.26
PRE6YOL038W MGR2Q02889 113 aa7.17□□□□□ -1.26
PRE6YOL038W YOR008C-AQ3E7B9 74 aa7.17□□□□□ -1.26
PRE6YOL038W YIL059CP40520 121 aa7.16□□□□□ -1.26
PRE6YOL038W PKR1Q03880 122 aaKnown RBP7.16□□□□□ -1.26
PRE6YOL038W AQY1P0CD91 305 aa7.15□□□□□ -1.26
PRE6YOL038W PCL2P25693 308 aa7.15□□□□□ -1.26
PRE6YOL038W ERG27Q12452 347 aaKnown RBP7.15□□□□□ -1.26
PRE6YOL038W ADH2P00331 348 aaKnown RBP7.14□□□□□ -1.27
PRE6YOL038W PRE1P22141 198 aaKnown RBP7.14□□□□□ -1.27
PRE6YOL038W MRP49P32388 137 aa7.14□□□□□ -1.27
PRE6YOL038W MRPL11P36521 249 aaPredicted RBP7.14□□□□□ -1.27
PRE6YOL038W TOS6P48560 102 aa7.14□□□□□ -1.27
PRE6YOL038W AIM29P36154 155 aa7.13□□□□□ -1.27
PRE6YOL038W URM1P40554 99 aaPredicted RBP7.13□□□□□ -1.27
PRE6YOL038W OST3P48439 350 aa7.13□□□□□ -1.27
PRE6YOL038W YGL088WP53151 121 aa7.13□□□□□ -1.27
PRE6YOL038W YBL081WP38180 368 aaKnown RBP7.12□□□□□ -1.27
PRE6YOL038W POP3P53833 195 aaPredicted RBP7.12□□□□□ -1.27
PRE6YOL038W COA6Q3E846 104 aa7.12□□□□□ -1.27
PRE6YOL038W YAR023CD6VPM8 179 aa7.11□□□□□ -1.27
PRE6YOL038W HMRA2P0CY13 119 aa7.11□□□□□ -1.27
PRE6YOL038W RPL16AP26784 199 aaKnown RBP7.11□□□□□ -1.27
PRE6YOL038W BET5Q03630 159 aa7.11□□□□□ -1.27
PRE6YOL038W YCL021W-AQ96VH3 125 aa7.11□□□□□ -1.27
PRE6YOL038W YPR010C-AA5Z2X5 72 aa7.1□□□□□ -1.27
PRE6YOL038W TRP1P00912 224 aa7.1□□□□□ -1.27
PRE6YOL038W RPL27BP0C2H7 136 aaKnown RBP7.1□□□□□ -1.27
PRE6YOL038W YJR146WP47174 117 aa7.1□□□□□ -1.27
PRE6YOL038W YDR042CQ03205 200 aa7.1□□□□□ -1.27
PRE6YOL038W YIL134C-AQ45U18 67 aa7.1□□□□□ -1.27
PRE6YOL038W APS1P35181 156 aa7.09□□□□□ -1.27
PRE6YOL038W SEN15Q04675 128 aa7.09□□□□□ -1.27
PRE6YOL038W CNL1Q06333 122 aa7.08□□□□□ -1.28
PRE6YOL038W PAU16P35994 123 aa7.07□□□□□ -1.28
PRE6YOL038W DFM1Q12743 341 aaKnown RBP7.07□□□□□ -1.28
PRE6YOL038W RPL31AP0C2H8 113 aaKnown RBP7.06□□□□□ -1.28
PRE6YOL038W ERG28P40030 148 aa7.06□□□□□ -1.28
PRE6YOL038W YER085CP40058 173 aa7.06□□□□□ -1.28
PRE6YOL038W YLR194CQ05777 254 aa7.06□□□□□ -1.28
PRE6YOL038W SMP1P38128 452 aa7.05□□□□□ -1.28
PRE6YOL038W YBR219CP38317 127 aa7.05□□□□□ -1.28
PRE6YOL038W FYV4P38783 130 aaPredicted RBP7.05□□□□□ -1.28
PRE6YOL038W YAL064WP39711 94 aa7.05□□□□□ -1.28
PRE6YOL038W YMR103CQ04436 120 aa7.05□□□□□ -1.28
PRE6YOL038W YEL008WP40001 126 aa7.04□□□□□ -1.28
PRE6YOL038W YLR050CQ12155 161 aaKnown RBP7.04□□□□□ -1.28
PRE6YOL038W COA3Q3E7B2 85 aa7.04□□□□□ -1.28
PRE6YOL038W YLR112WQ12130 139 aa7.03□□□□□ -1.28
PRE6YOL038W YLR307C-AQ3E825 87 aa7.03□□□□□ -1.28
PRE6YOL038W YAR029WP39549 74 aa7.02□□□□□ -1.29
PRE6YOL038W YFL067WP43537 175 aa7.02□□□□□ -1.29
PRE6YOL038W TPT1Q12272 230 aaKnown RBP7.02□□□□□ -1.29
PRE6YOL038W ENV10Q99382 181 aa7.02□□□□□ -1.29
PRE6YOL038W CGR1P53188 120 aa7.01□□□□□ -1.29
PRE6YOL038W YDR029WQ12111 104 aa7.01□□□□□ -1.29
PRE6YOL038W ATP15P21306 62 aa7□□□□□ -1.29
PRE6YOL038W RPC10P40422 70 aa7□□□□□ -1.29
PRE6YOL038W HAC1P41546 238 aa7□□□□□ -1.29
PRE6YOL038W SCS22Q6Q595 175 aa7□□□□□ -1.29
PRE6YOL038W YKL070WP36087 169 aa6.99□□□□□ -1.29
PRE6YOL038W YPL261CQ08976 102 aa6.99□□□□□ -1.29
PRE6YOL038W FUN14P18411 198 aa6.97□□□□□ -1.29
PRE6YOL038W MSL1P40567 111 aaPredicted RBP6.96□□□□□ -1.3
PRE6YOL038W SNA2P56508 79 aa6.96□□□□□ -1.3
PRE6YOL038W SEC11P15367 167 aa6.95□□□□□ -1.3
PRE6YOL038W RPL32P38061 130 aaKnown RBP6.95□□□□□ -1.3
PRE6YOL038W CIN5P40917 295 aa6.95□□□□□ -1.3
PRE6YOL038W LSM8P47093 109 aaKnown RBP6.95□□□□□ -1.3
PRE6YOL038W AIM11P87275 137 aa6.95□□□□□ -1.3
PRE6YOL038W YMR295CQ03559 197 aa6.95□□□□□ -1.3
PRE6YOL038W YGL230CP53074 147 aa6.94□□□□□ -1.3
PRE6YOL038W ISU2Q12056 156 aa6.94□□□□□ -1.3
PRE6YOL038W YKL044WP36092 106 aa6.93□□□□□ -1.3
PRE6YOL038W SHU1P38751 150 aa6.93□□□□□ -1.3
PRE6YOL038W LCL1Q02786 101 aa6.93□□□□□ -1.3
PRE6YOL038W FYV7Q12247 151 aa6.93□□□□□ -1.3
PRE6YOL038W YMR175W-AQ3E766 64 aa6.93□□□□□ -1.3
PRE6YOL038W PEX17P40155 199 aa6.92□□□□□ -1.3
PRE6YOL038W PPT2Q12036 173 aa6.92□□□□□ -1.3
PRE6YOL038W MRPL44P19956 98 aa6.91□□□□□ -1.3
PRE6YOL038W YCR007CP25354 239 aa6.91□□□□□ -1.3
PRE6YOL038W PEX22P39718 180 aa6.91□□□□□ -1.3
PRE6YOL038W RPL18AP0CX49 186 aaKnown RBP6.9□□□□□ -1.3
PRE6YOL038W RPL18BP0CX50 186 aaKnown RBP6.9□□□□□ -1.3
PRE6YOL038W YPL073CP40323 161 aa6.9□□□□□ -1.3
PRE6YOL038W MMS2P53152 137 aa6.9□□□□□ -1.3
PRE6YOL038W DDR48P18899 430 aaKnown RBP6.89□□□□□ -1.31
PRE6YOL038W YKR041WP36134 250 aa6.89□□□□□ -1.31
PRE6YOL038W NAT5Q08689 176 aa6.89□□□□□ -1.31
PRE6YOL038W ATP5P09457 212 aa6.88□□□□□ -1.31
PRE6YOL038W YDL157CQ12082 118 aa6.88□□□□□ -1.31
PRE6YOL038W QCR8P08525 94 aa6.87□□□□□ -1.31
PRE6YOL038W VTC1P40046 129 aaRIP-Chip data6.87□□□□□ -1.31not detected
PRE6YOL038W YAL065CO13511 128 aa6.86□□□□□ -1.31
PRE6YOL038W ADH1P00330 348 aaKnown RBP6.86□□□□□ -1.31
PRE6YOL038W HAP3P13434 144 aa6.86□□□□□ -1.31
PRE6YOL038W RPF1P38805 295 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms