RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C PAI3P01094 68 aa4.6□□□□□ -1.67
SCS7YMR272C YMR141CP40211 102 aa4.6□□□□□ -1.67
SCS7YMR272C GIS2P53849 153 aaKnown RBP RIP-Chip data4.6□□□□□ -1.67not detected
SCS7YMR272C YNL198CP40166 100 aa4.59□□□□□ -1.67
SCS7YMR272C BET5Q03630 159 aa4.59□□□□□ -1.67
SCS7YMR272C YPL257WQ08974 193 aa4.59□□□□□ -1.67
SCS7YMR272C RTC6O14464 93 aa4.58□□□□□ -1.68
SCS7YMR272C ANB1P19211 157 aa4.58□□□□□ -1.68
SCS7YMR272C AGA1P32323 725 aa4.58□□□□□ -1.68
SCS7YMR272C PET8P38921 284 aa4.58□□□□□ -1.68
SCS7YMR272C YNL217WP40152 326 aa4.58□□□□□ -1.68
SCS7YMR272C GAT4P40569 121 aa4.58□□□□□ -1.68
SCS7YMR272C PMP3P87284 55 aa4.58□□□□□ -1.68
SCS7YMR272C YML079WQ03629 201 aa4.58□□□□□ -1.68
SCS7YMR272C SLO1Q3E784 85 aa4.58□□□□□ -1.68
SCS7YMR272C RPL16BP26785 198 aaKnown RBP4.57□□□□□ -1.68
SCS7YMR272C ARO2P28777 376 aaKnown RBP4.57□□□□□ -1.68
SCS7YMR272C RRT13P40042 185 aa4.57□□□□□ -1.68
SCS7YMR272C ADH1P00330 348 aaKnown RBP4.56□□□□□ -1.68
SCS7YMR272C RPL27AP0C2H6 136 aaKnown RBP4.56□□□□□ -1.68
SCS7YMR272C CPR1P14832 162 aaKnown RBP4.56□□□□□ -1.68
SCS7YMR272C CDC43P18898 376 aa4.56□□□□□ -1.68
SCS7YMR272C APS1P35181 156 aa4.56□□□□□ -1.68
SCS7YMR272C YHR140WP38842 239 aa4.56□□□□□ -1.68
SCS7YMR272C YIL014C-AQ02598 104 aa4.56□□□□□ -1.68
SCS7YMR272C ISU2Q12056 156 aa4.56□□□□□ -1.68
SCS7YMR272C YBR200W-AQ3E755 54 aa4.56□□□□□ -1.68
SCS7YMR272C YPR053CQ6Q5F3 151 aa4.56□□□□□ -1.68
SCS7YMR272C YOL085CQ99345 113 aa4.56□□□□□ -1.68
SCS7YMR272C HTL1Q9URQ5 78 aa4.56□□□□□ -1.68
SCS7YMR272C YKR032WP36127 104 aa4.55□□□□□ -1.68
SCS7YMR272C DGA1Q08650 418 aa4.55□□□□□ -1.68
SCS7YMR272C YCR023CP25351 611 aa4.54□□□□□ -1.68
SCS7YMR272C KTI12P34253 313 aaKnown RBP4.54□□□□□ -1.68
SCS7YMR272C POP7P38291 140 aa4.54□□□□□ -1.68
SCS7YMR272C CIN5P40917 295 aa4.54□□□□□ -1.68
SCS7YMR272C PBA1Q05778 276 aa4.54□□□□□ -1.68
SCS7YMR272C YLR042CQ07990 161 aa4.54□□□□□ -1.68
SCS7YMR272C YIL102C-AQ2V2P5 75 aa4.54□□□□□ -1.68
SCS7YMR272C RPL42AP0CX27 106 aaKnown RBP4.53□□□□□ -1.68
SCS7YMR272C RPL42BP0CX28 106 aaKnown RBP4.53□□□□□ -1.68
SCS7YMR272C SVP26P38869 228 aa4.53□□□□□ -1.68
SCS7YMR272C KRE9P39005 276 aa4.53□□□□□ -1.68
SCS7YMR272C GPI19Q04082 140 aa4.53□□□□□ -1.68
SCS7YMR272C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68 RIP-Chip
SCS7YMR272C DFM1Q12743 341 aaKnown RBP4.53□□□□□ -1.68
SCS7YMR272C RPL27BP0C2H7 136 aaKnown RBP4.52□□□□□ -1.69
SCS7YMR272C YKL044WP36092 106 aa4.52□□□□□ -1.69
SCS7YMR272C YPL073CP40323 161 aa4.52□□□□□ -1.69
SCS7YMR272C ELC1Q03071 99 aa4.52□□□□□ -1.69
SCS7YMR272C YDR042CQ03205 200 aa4.52□□□□□ -1.69
SCS7YMR272C YMR103CQ04436 120 aa4.52□□□□□ -1.69
SCS7YMR272C HYP2P23301 157 aaKnown RBP4.51□□□□□ -1.69
SCS7YMR272C YER076CP40049 302 aa4.51□□□□□ -1.69
SCS7YMR272C YMR122W-AQ3E842 84 aa4.51□□□□□ -1.69
SCS7YMR272C AQY1P0CD91 305 aa4.5□□□□□ -1.69
SCS7YMR272C YPT53P36019 220 aa4.5□□□□□ -1.69
SCS7YMR272C ERG28P40030 148 aa4.5□□□□□ -1.69
SCS7YMR272C RPL33AP05744 107 aaKnown RBP4.49□□□□□ -1.69
SCS7YMR272C HMRA2P0CY13 119 aa4.49□□□□□ -1.69
SCS7YMR272C PCL2P25693 308 aa4.49□□□□□ -1.69
SCS7YMR272C SAP30P38429 201 aa4.49□□□□□ -1.69
SCS7YMR272C RPL33BP41056 107 aaKnown RBP4.49□□□□□ -1.69
SCS7YMR272C ATP23P53722 227 aa4.49□□□□□ -1.69
SCS7YMR272C ARC15P40518 154 aaRIP-Chip data4.48□□□□□ -1.69not detected
SCS7YMR272C YLR296WQ05898 108 aa4.48□□□□□ -1.69
SCS7YMR272C YPR195CQ06594 109 aa4.48□□□□□ -1.69
SCS7YMR272C YPL261CQ08976 102 aa4.48□□□□□ -1.69
SCS7YMR272C YLR112WQ12130 139 aa4.48□□□□□ -1.69
SCS7YMR272C YPL229WQ99395 206 aa4.48□□□□□ -1.69
SCS7YMR272C YAR023CD6VPM8 179 aa4.47□□□□□ -1.69
SCS7YMR272C UBC5P15732 148 aa4.47□□□□□ -1.69
SCS7YMR272C RPL32P38061 130 aaKnown RBP4.47□□□□□ -1.69
SCS7YMR272C YEL067CP39978 195 aa4.47□□□□□ -1.69
SCS7YMR272C MGR2Q02889 113 aa4.47□□□□□ -1.69
SCS7YMR272C YKL023C-AQ2V2P3 75 aa4.47□□□□□ -1.69
SCS7YMR272C MRP10O75012 95 aa4.46□□□□□ -1.7
SCS7YMR272C PFY1P07274 126 aa4.46□□□□□ -1.7
SCS7YMR272C YDR034C-AP0C289 58 aa4.46□□□□□ -1.7
SCS7YMR272C YKR041WP36134 250 aa4.46□□□□□ -1.7
SCS7YMR272C OXA1P39952 402 aa4.46□□□□□ -1.7
SCS7YMR272C YER181CP40097 107 aa4.46□□□□□ -1.7
SCS7YMR272C YFR057WP43625 151 aa4.46□□□□□ -1.7
SCS7YMR272C FCF1Q05498 189 aaPredicted RBP4.46□□□□□ -1.7
SCS7YMR272C YKL070WP36087 169 aa4.45□□□□□ -1.7
SCS7YMR272C DCV1P43595 202 aa4.45□□□□□ -1.7
SCS7YMR272C MET32Q12041 191 aa4.45□□□□□ -1.7
SCS7YMR272C COA3Q3E7B2 85 aa4.45□□□□□ -1.7
SCS7YMR272C YDL022C-AP0C5L6 82 aa4.44□□□□□ -1.7
SCS7YMR272C ATX1P38636 73 aa4.44□□□□□ -1.7
SCS7YMR272C YAR029WP39549 74 aa4.44□□□□□ -1.7
SCS7YMR272C YIL059CP40520 121 aa4.44□□□□□ -1.7
SCS7YMR272C YNR077CP53758 84 aa4.44□□□□□ -1.7
SCS7YMR272C YMR320WQ04897 101 aa4.44□□□□□ -1.7
SCS7YMR272C ENV10Q99382 181 aa4.44□□□□□ -1.7
SCS7YMR272C INO4P13902 151 aa4.43□□□□□ -1.7
SCS7YMR272C NHP2P32495 156 aaPredicted RBP4.43□□□□□ -1.7
SCS7YMR272C VTC1P40046 129 aaRIP-Chip data4.43□□□□□ -1.7not detected
SCS7YMR272C OST2P46964 130 aa4.43□□□□□ -1.7
SCS7YMR272C LCL2Q08045 131 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms