RNA–Protein interactions for RNA: YLR420W

URA4, Transcript of Dihydroorotase, yeast

Gene URA4, Length 1,095 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA4	YLR420W	POM33	Q12164	279 aa		2.71	□□□□□ -1.98
URA4	YLR420W	RPS22B	Q3E7Y3	130 aa	Known RBP	2.71	□□□□□ -1.98
URA4	YLR420W	SEC4	P07560	215 aa	Known RBP	2.7	□□□□□ -1.98
URA4	YLR420W	CYT2	Q00873	224 aa		2.7	□□□□□ -1.98
URA4	YLR420W	ARL3	Q02804	198 aa		2.7	□□□□□ -1.98
URA4	YLR420W	AIM34	Q03673	198 aa		2.7	□□□□□ -1.98
URA4	YLR420W	GTO3	Q04806	366 aa		2.7	□□□□□ -1.98
URA4	YLR420W	DXO1	Q06349	442 aa		2.7	□□□□□ -1.98
URA4	YLR420W	YLR042C	Q07990	161 aa		2.7	□□□□□ -1.98
URA4	YLR420W	YCR023C	P25351	611 aa		2.69	□□□□□ -1.98
URA4	YLR420W	MRPL28	P36527	147 aa		2.69	□□□□□ -1.98
URA4	YLR420W	PET8	P38921	284 aa		2.69	□□□□□ -1.98
URA4	YLR420W	SGF11	Q03067	99 aa		2.69	□□□□□ -1.98
URA4	YLR420W	WIP1	Q2V2P8	89 aa		2.69	□□□□□ -1.98
URA4	YLR420W	YCR075W-A	Q3E830	75 aa		2.69	□□□□□ -1.98
URA4	YLR420W	YNL217W	P40152	326 aa		2.68	□□□□□ -1.98
URA4	YLR420W	YNL200C	P40165	246 aa	Known RBP	2.68	□□□□□ -1.98
URA4	YLR420W	TVP18	Q04767	167 aa		2.68	□□□□□ -1.98
URA4	YLR420W	YGR240C-A	Q3E786	66 aa		2.68	□□□□□ -1.98
URA4	YLR420W	SAL1	D6W196	494 aa		2.67	□□□□□ -1.98
URA4	YLR420W	YIL014C-A	Q02598	104 aa		2.67	□□□□□ -1.98
URA4	YLR420W	DGA1	Q08650	418 aa		2.67	□□□□□ -1.98
URA4	YLR420W	PFY1	P07274	126 aa		2.66	□□□□□ -1.98
URA4	YLR420W	GSP1	P32835	219 aa	Known RBP	2.66	□□□□□ -1.98
URA4	YLR420W	GSP2	P32836	220 aa	Known RBP	2.66	□□□□□ -1.98
URA4	YLR420W	TEM1	P38987	245 aa		2.66	□□□□□ -1.98
URA4	YLR420W	CDC40	P40968	455 aa	Predicted RBP	2.66	□□□□□ -1.98
URA4	YLR420W	DCV1	P43595	202 aa		2.66	□□□□□ -1.98
URA4	YLR420W	MGR2	Q02889	113 aa		2.66	□□□□□ -1.98
URA4	YLR420W	YPR014C	Q6B0W2	109 aa		2.66	□□□□□ -1.98
URA4	YLR420W	UBC5	P15732	148 aa		2.65	□□□□□ -1.99
URA4	YLR420W	PRE1	P22141	198 aa	Known RBP	2.65	□□□□□ -1.99
URA4	YLR420W	YKR070W	P36151	352 aa	Known RBP	2.65	□□□□□ -1.99
URA4	YLR420W	SEC72	P39742	193 aa	Known RBP	2.65	□□□□□ -1.99
URA4	YLR420W	YER076C	P40049	302 aa		2.65	□□□□□ -1.99
URA4	YLR420W	YER134C	P40081	178 aa		2.65	□□□□□ -1.99
URA4	YLR420W	FCF1	Q05498	189 aa	Predicted RBP	2.65	□□□□□ -1.99
URA4	YLR420W	CMC2	Q3E7A4	109 aa		2.65	□□□□□ -1.99
URA4	YLR420W	SSS1	P35179	80 aa		2.64	□□□□□ -1.99
URA4	YLR420W	YJL028W	P47062	111 aa		2.64	□□□□□ -1.99
URA4	YLR420W	OST3	P48439	350 aa		2.64	□□□□□ -1.99
URA4	YLR420W	TOS6	P48560	102 aa		2.64	□□□□□ -1.99
URA4	YLR420W	PMP3	P87284	55 aa		2.64	□□□□□ -1.99
URA4	YLR420W	CUE4	Q04201	117 aa	Predicted RBP	2.64	□□□□□ -1.99
URA4	YLR420W	MRP49	P32388	137 aa		2.63	□□□□□ -1.99
URA4	YLR420W	EDC2	P40023	145 aa	Predicted RBP	2.63	□□□□□ -1.99
URA4	YLR420W	YJR146W	P47174	117 aa		2.63	□□□□□ -1.99
URA4	YLR420W	YGL088W	P53151	121 aa		2.63	□□□□□ -1.99
URA4	YLR420W	YDR042C	Q03205	200 aa		2.63	□□□□□ -1.99
URA4	YLR420W	SEN15	Q04675	128 aa		2.63	□□□□□ -1.99
URA4	YLR420W	DPP1	Q05521	289 aa		2.63	□□□□□ -1.99
URA4	YLR420W	YLL066W-B	Q8TGJ7	56 aa		2.63	□□□□□ -1.99
URA4	YLR420W	ARC15	P40518	154 aa	RIP-Chip data	2.62	□□□□□ -1.99	not detected
URA4	YLR420W	SPC1	P46965	94 aa		2.62	□□□□□ -1.99
URA4	YLR420W	ERV14	P53173	138 aa		2.62	□□□□□ -1.99
URA4	YLR420W	POP3	P53833	195 aa	Predicted RBP	2.62	□□□□□ -1.99
URA4	YLR420W	YOR008C-A	Q3E7B9	74 aa		2.62	□□□□□ -1.99
URA4	YLR420W	YMR122W-A	Q3E842	84 aa		2.62	□□□□□ -1.99
URA4	YLR420W	YIL134C-A	Q45U18	67 aa		2.62	□□□□□ -1.99
URA4	YLR420W	HTL1	Q9URQ5	78 aa		2.62	□□□□□ -1.99
URA4	YLR420W	RPL33A	P05744	107 aa	Known RBP	2.61	□□□□□ -1.99
URA4	YLR420W	RPL27B	P0C2H7	136 aa	Known RBP	2.61	□□□□□ -1.99
URA4	YLR420W	HMRA2	P0CY13	119 aa		2.61	□□□□□ -1.99
URA4	YLR420W	AIM29	P36154	155 aa		2.61	□□□□□ -1.99
URA4	YLR420W	MRPL11	P36521	249 aa	Predicted RBP	2.61	□□□□□ -1.99
URA4	YLR420W	YBR209W	P38311	105 aa		2.61	□□□□□ -1.99
URA4	YLR420W	RPL33B	P41056	107 aa	Known RBP	2.61	□□□□□ -1.99
URA4	YLR420W	ERI1	P62651	68 aa	Known RBP	2.61	□□□□□ -1.99
URA4	YLR420W	PKR1	Q03880	122 aa	Known RBP	2.61	□□□□□ -1.99
URA4	YLR420W	COA3	Q3E7B2	85 aa		2.61	□□□□□ -1.99
URA4	YLR420W	RPL18A	P0CX49	186 aa	Known RBP	2.6	□□□□□ -1.99
URA4	YLR420W	RPL18B	P0CX50	186 aa	Known RBP	2.6	□□□□□ -1.99
URA4	YLR420W	PAU16	P35994	123 aa		2.6	□□□□□ -1.99
URA4	YLR420W	FYV4	P38783	130 aa	Predicted RBP	2.6	□□□□□ -1.99
URA4	YLR420W	YPL080C	Q02826	108 aa		2.6	□□□□□ -1.99
URA4	YLR420W	YMR103C	Q04436	120 aa		2.6	□□□□□ -1.99
URA4	YLR420W	COA6	Q3E846	104 aa		2.6	□□□□□ -1.99
URA4	YLR420W	RTC6	O14464	93 aa		2.59	□□□□□ -1.99
URA4	YLR420W	APS1	P35181	156 aa		2.59	□□□□□ -1.99
URA4	YLR420W	YEL008W	P40001	126 aa		2.59	□□□□□ -1.99
URA4	YLR420W	YMR320W	Q04897	101 aa		2.59	□□□□□ -1.99
URA4	YLR420W	CNL1	Q06333	122 aa		2.59	□□□□□ -1.99
URA4	YLR420W	SCS22	Q6Q595	175 aa		2.59	□□□□□ -1.99
URA4	YLR420W	MDN1	Q12019	4910 aa	Known RBP	2.59	□□□□□ -2
URA4	YLR420W	YPR010C-A	A5Z2X5	72 aa		2.58	□□□□□ -2
URA4	YLR420W	RPL31A	P0C2H8	113 aa	Known RBP	2.58	□□□□□ -2
URA4	YLR420W	ATP15	P21306	62 aa		2.58	□□□□□ -2
URA4	YLR420W	YKL070W	P36087	169 aa		2.58	□□□□□ -2
URA4	YLR420W	YBR219C	P38317	127 aa		2.58	□□□□□ -2
URA4	YLR420W	ERG28	P40030	148 aa		2.58	□□□□□ -2
URA4	YLR420W	YER085C	P40058	173 aa		2.58	□□□□□ -2
URA4	YLR420W	YLR050C	Q12155	161 aa	Known RBP	2.58	□□□□□ -2
URA4	YLR420W	YDL022C-A	P0C5L6	82 aa		2.57	□□□□□ -2
URA4	YLR420W	SEC11	P15367	167 aa		2.57	□□□□□ -2
URA4	YLR420W	SVP26	P38869	228 aa		2.57	□□□□□ -2
URA4	YLR420W	YMR295C	Q03559	197 aa		2.57	□□□□□ -2
URA4	YLR420W	RRT15	Q3E811	62 aa		2.57	□□□□□ -2
URA4	YLR420W	FUN14	P18411	198 aa		2.56	□□□□□ -2
URA4	YLR420W	YBL081W	P38180	368 aa	Known RBP	2.56	□□□□□ -2
URA4	YLR420W	YAR029W	P39549	74 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms