RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C YIL014C-AQ02598 104 aa6.92□□□□□ -1.3
YSR3YKR053C YOR008C-AQ3E7B9 74 aa6.91□□□□□ -1.3
YSR3YKR053C YPR014CQ6B0W2 109 aa6.91□□□□□ -1.3
YSR3YKR053C GTT1P40582 234 aa6.9□□□□□ -1.3
YSR3YKR053C OST3P48439 350 aa6.9□□□□□ -1.3
YSR3YKR053C YGL118CP53132 145 aa6.89□□□□□ -1.31
YSR3YKR053C ENV10Q99382 181 aa6.89□□□□□ -1.31
YSR3YKR053C PRE1P22141 198 aaKnown RBP6.88□□□□□ -1.31
YSR3YKR053C PCL2P25693 308 aa6.88□□□□□ -1.31
YSR3YKR053C YAR029WP39549 74 aa6.88□□□□□ -1.31
YSR3YKR053C YEL008WP40001 126 aa6.88□□□□□ -1.31
YSR3YKR053C YER085CP40058 173 aa6.88□□□□□ -1.31
YSR3YKR053C RPC10P40422 70 aa6.88□□□□□ -1.31
YSR3YKR053C URM1P40554 99 aaPredicted RBP6.88□□□□□ -1.31
YSR3YKR053C CYT2Q00873 224 aa6.88□□□□□ -1.31
YSR3YKR053C MED7Q08278 222 aa6.88□□□□□ -1.31
YSR3YKR053C ISU2Q12056 156 aa6.88□□□□□ -1.31
YSR3YKR053C YCL021W-AQ96VH3 125 aa6.88□□□□□ -1.31
YSR3YKR053C PKR1Q03880 122 aaKnown RBP6.87□□□□□ -1.31
YSR3YKR053C ERV14P53173 138 aa6.86□□□□□ -1.31
YSR3YKR053C YBL081WP38180 368 aaKnown RBP6.84□□□□□ -1.31
YSR3YKR053C YBR219CP38317 127 aa6.84□□□□□ -1.31
YSR3YKR053C YAL064WP39711 94 aa6.84□□□□□ -1.31
YSR3YKR053C YLR194CQ05777 254 aa6.84□□□□□ -1.31
YSR3YKR053C YDR029WQ12111 104 aa6.84□□□□□ -1.31
YSR3YKR053C DFM1Q12743 341 aaKnown RBP6.84□□□□□ -1.31
YSR3YKR053C YMR175W-AQ3E766 64 aa6.84□□□□□ -1.31
YSR3YKR053C CIN5P40917 295 aa6.83□□□□□ -1.32
YSR3YKR053C HMRA2P0CY13 119 aa6.82□□□□□ -1.32
YSR3YKR053C GSP1P32835 219 aaKnown RBP6.82□□□□□ -1.32
YSR3YKR053C GSP2P32836 220 aaKnown RBP6.82□□□□□ -1.32
YSR3YKR053C YDR042CQ03205 200 aa6.81□□□□□ -1.32
YSR3YKR053C COA3Q3E7B2 85 aa6.81□□□□□ -1.32
YSR3YKR053C HTL1Q9URQ5 78 aa6.81□□□□□ -1.32
YSR3YKR053C TPT1Q12272 230 aaKnown RBP6.8□□□□□ -1.32
YSR3YKR053C APS1P35181 156 aa6.79□□□□□ -1.32
YSR3YKR053C SNA2P56508 79 aa6.79□□□□□ -1.32
YSR3YKR053C YMR295CQ03559 197 aa6.79□□□□□ -1.32
YSR3YKR053C RPL31AP0C2H8 113 aaKnown RBP6.78□□□□□ -1.32
YSR3YKR053C YLR112WQ12130 139 aa6.77□□□□□ -1.33
YSR3YKR053C VTC1P40046 129 aaRIP-Chip data6.76□□□□□ -1.33not detected
YSR3YKR053C RPL27BP0C2H7 136 aaKnown RBP6.75□□□□□ -1.33
YSR3YKR053C YER134CP40081 178 aa6.75□□□□□ -1.33
YSR3YKR053C POP3P53833 195 aaPredicted RBP6.75□□□□□ -1.33
YSR3YKR053C LCL1Q02786 101 aa6.75□□□□□ -1.33
YSR3YKR053C ARL3Q02804 198 aa6.75□□□□□ -1.33
YSR3YKR053C YDL241WQ07738 123 aa6.75□□□□□ -1.33
YSR3YKR053C YLR307C-AQ3E825 87 aa6.75□□□□□ -1.33
YSR3YKR053C YAL065CO13511 128 aa6.74□□□□□ -1.33
YSR3YKR053C SMP1P38128 452 aa6.74□□□□□ -1.33
YSR3YKR053C CMC2Q3E7A4 109 aa6.74□□□□□ -1.33
YSR3YKR053C ATP15P21306 62 aa6.73□□□□□ -1.33
YSR3YKR053C YMR103CQ04436 120 aa6.73□□□□□ -1.33
YSR3YKR053C YKL070WP36087 169 aa6.71□□□□□ -1.34
YSR3YKR053C COX14P39103 70 aa6.7□□□□□ -1.34
YSR3YKR053C FYV4P38783 130 aaPredicted RBP6.68□□□□□ -1.34
YSR3YKR053C PEX22P39718 180 aa6.68□□□□□ -1.34
YSR3YKR053C YML108WQ03759 105 aa6.68□□□□□ -1.34
YSR3YKR053C PPT2Q12036 173 aa6.68□□□□□ -1.34
YSR3YKR053C YGL041C-BQ3E750 60 aa6.68□□□□□ -1.34
YSR3YKR053C SHU1P38751 150 aa6.67□□□□□ -1.34
YSR3YKR053C AIM11P87275 137 aa6.67□□□□□ -1.34
YSR3YKR053C ECM12O13529 151 aa6.66□□□□□ -1.34
YSR3YKR053C TOA2P32774 122 aa6.66□□□□□ -1.34
YSR3YKR053C MMS2P53152 137 aa6.66□□□□□ -1.34
YSR3YKR053C AQY2P0CD90 149 aa6.65□□□□□ -1.34
YSR3YKR053C RPL32P38061 130 aaKnown RBP6.65□□□□□ -1.34
YSR3YKR053C RPF1P38805 295 aaKnown RBP6.64□□□□□ -1.35
YSR3YKR053C PEX17P40155 199 aa6.64□□□□□ -1.35
YSR3YKR053C YFL067WP43537 175 aa6.63□□□□□ -1.35
YSR3YKR053C CUE4Q04201 117 aaPredicted RBP6.63□□□□□ -1.35
YSR3YKR053C YLR050CQ12155 161 aaKnown RBP6.63□□□□□ -1.35
YSR3YKR053C PAU16P35994 123 aa6.62□□□□□ -1.35
YSR3YKR053C OXA1P39952 402 aa6.62□□□□□ -1.35
YSR3YKR053C AIM19P40502 157 aa6.62□□□□□ -1.35
YSR3YKR053C CWP2P43497 92 aa6.62□□□□□ -1.35
YSR3YKR053C CNL1Q06333 122 aa6.62□□□□□ -1.35
YSR3YKR053C STF1P01098 86 aa6.61□□□□□ -1.35
YSR3YKR053C RPL18AP0CX49 186 aaKnown RBP6.61□□□□□ -1.35
YSR3YKR053C RPL18BP0CX50 186 aaKnown RBP6.61□□□□□ -1.35
YSR3YKR053C ADH1P00330 348 aaKnown RBP6.6□□□□□ -1.35
YSR3YKR053C QCR8P08525 94 aa6.6□□□□□ -1.35
YSR3YKR053C MRPL33P20084 86 aa6.6□□□□□ -1.35
YSR3YKR053C SMD1Q02260 146 aaPredicted RBP6.6□□□□□ -1.35
YSR3YKR053C YPL261CQ08976 102 aa6.6□□□□□ -1.35
YSR3YKR053C YDL022C-AP0C5L6 82 aa6.59□□□□□ -1.35
YSR3YKR053C ABF2Q02486 183 aa6.59□□□□□ -1.35
YSR3YKR053C SSS1P35179 80 aa6.58□□□□□ -1.36
YSR3YKR053C MVB12P42939 101 aa6.58□□□□□ -1.36
YSR3YKR053C TIM11P81449 96 aaPredicted RBP6.58□□□□□ -1.36
YSR3YKR053C Q0032Q9ZZX7 96 aa6.58□□□□□ -1.36
YSR3YKR053C YKR041WP36134 250 aa6.57□□□□□ -1.36
YSR3YKR053C MBF1O14467 151 aaKnown RBP6.56□□□□□ -1.36
YSR3YKR053C YBL039W-BP0C268 59 aa6.56□□□□□ -1.36
YSR3YKR053C YFL019CP43576 117 aa6.56□□□□□ -1.36
YSR3YKR053C ATP16Q12165 160 aa6.56□□□□□ -1.36
YSR3YKR053C YBL112CQ3E7Y4 105 aa6.56□□□□□ -1.36
YSR3YKR053C HAP3P13434 144 aa6.55□□□□□ -1.36
YSR3YKR053C MRPL11P36521 249 aaPredicted RBP6.55□□□□□ -1.36
YSR3YKR053C COA6Q3E846 104 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms