RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	ARL3	Q02804	198 aa		2.77	□□□□□ -1.97
LOS1	YKL205W	SAL1	D6W196	494 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	RPL31A	P0C2H8	113 aa	Known RBP	2.76	□□□□□ -1.97
LOS1	YKL205W	PEX17	P40155	199 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	PMP3	P87284	55 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	DPP1	Q05521	289 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	QCR8	P08525	94 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	PAM17	P36147	197 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	YDR115W	Q04598	105 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	CSM4	Q08955	156 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	YLR122C	Q12312	125 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	YOR008C-A	Q3E7B9	74 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	MBF1	O14467	151 aa	Known RBP	2.76	□□□□□ -1.97
LOS1	YKL205W	YER134C	P40081	178 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	CRC1	Q12289	327 aa		2.76	□□□□□ -1.97
LOS1	YKL205W	MEC1	P38111	2368 aa		2.75	□□□□□ -1.97
LOS1	YKL205W	RPL16A	P26784	199 aa	Known RBP	2.75	□□□□□ -1.97
LOS1	YKL205W	SCM4	P32564	187 aa		2.75	□□□□□ -1.97
LOS1	YKL205W	TOA2	P32774	122 aa		2.75	□□□□□ -1.97
LOS1	YKL205W	YGL015C	P33199	130 aa		2.75	□□□□□ -1.97
LOS1	YKL205W	MRPL44	P19956	98 aa		2.75	□□□□□ -1.97
LOS1	YKL205W	YNL217W	P40152	326 aa		2.75	□□□□□ -1.97
LOS1	YKL205W	PCL2	P25693	308 aa		2.74	□□□□□ -1.97
LOS1	YKL205W	SSS1	P35179	80 aa		2.74	□□□□□ -1.97
LOS1	YKL205W	COX14	P39103	70 aa		2.74	□□□□□ -1.97
LOS1	YKL205W	ARC15	P40518	154 aa	RIP-Chip data	2.74	□□□□□ -1.97	not detected
LOS1	YKL205W	GLO1	P50107	326 aa		2.74	□□□□□ -1.97
LOS1	YKL205W	POP3	P53833	195 aa	Predicted RBP	2.74	□□□□□ -1.97
LOS1	YKL205W	TPT1	Q12272	230 aa	Known RBP	2.74	□□□□□ -1.97
LOS1	YKL205W	YAL065C	O13511	128 aa		2.74	□□□□□ -1.97
LOS1	YKL205W	POP7	P38291	140 aa		2.74	□□□□□ -1.97
LOS1	YKL205W	YOR020W-A	Q3E824	90 aa		2.74	□□□□□ -1.97
LOS1	YKL205W	HAC1	P41546	238 aa		2.73	□□□□□ -1.97
LOS1	YKL205W	UBC11	P52492	156 aa		2.73	□□□□□ -1.97
LOS1	YKL205W	HAL1	Q01766	294 aa		2.73	□□□□□ -1.97
LOS1	YKL205W	PKR1	Q03880	122 aa	Known RBP	2.73	□□□□□ -1.97
LOS1	YKL205W	YLR307C-A	Q3E825	87 aa		2.73	□□□□□ -1.97
LOS1	YKL205W	NRG2	P38082	220 aa		2.73	□□□□□ -1.97
LOS1	YKL205W	DGA1	Q08650	418 aa		2.73	□□□□□ -1.97
LOS1	YKL205W	YOL085C	Q99345	113 aa		2.73	□□□□□ -1.97
LOS1	YKL205W	RTC6	O14464	93 aa		2.73	□□□□□ -1.97
LOS1	YKL205W	PRE1	P22141	198 aa	Known RBP	2.73	□□□□□ -1.97
LOS1	YKL205W	RPR2	P40571	144 aa		2.72	□□□□□ -1.97
LOS1	YKL205W	TIM11	P81449	96 aa	Predicted RBP	2.72	□□□□□ -1.97
LOS1	YKL205W	YMR181C	Q03231	154 aa		2.72	□□□□□ -1.97
LOS1	YKL205W	APS1	P35181	156 aa		2.72	□□□□□ -1.97
LOS1	YKL205W	ENV10	Q99382	181 aa		2.72	□□□□□ -1.97
LOS1	YKL205W	YEL008W	P40001	126 aa		2.71	□□□□□ -1.97
LOS1	YKL205W	YNL190W	P53872	204 aa		2.71	□□□□□ -1.97
LOS1	YKL205W	YMR103C	Q04436	120 aa		2.71	□□□□□ -1.97
LOS1	YKL205W	IGO2	Q9P305	131 aa		2.71	□□□□□ -1.97
LOS1	YKL205W	YKR041W	P36134	250 aa		2.71	□□□□□ -1.98
LOS1	YKL205W	SHU1	P38751	150 aa		2.71	□□□□□ -1.98
LOS1	YKL205W	HAP3	P13434	144 aa		2.71	□□□□□ -1.98
LOS1	YKL205W	CPR1	P14832	162 aa	Known RBP	2.71	□□□□□ -1.98
LOS1	YKL205W	DAD2	P36162	133 aa		2.7	□□□□□ -1.98
LOS1	YKL205W	SEC72	P39742	193 aa	Known RBP	2.7	□□□□□ -1.98
LOS1	YKL205W	YMR320W	Q04897	101 aa		2.7	□□□□□ -1.98
LOS1	YKL205W	YBR219C	P38317	127 aa		2.7	□□□□□ -1.98
LOS1	YKL205W	YNR077C	P53758	84 aa		2.7	□□□□□ -1.98
LOS1	YKL205W	YIL134C-A	Q45U18	67 aa		2.7	□□□□□ -1.98
LOS1	YKL205W	AIM11	P87275	137 aa		2.7	□□□□□ -1.98
LOS1	YKL205W	PPT2	Q12036	173 aa		2.7	□□□□□ -1.98
LOS1	YKL205W	AIM29	P36154	155 aa		2.68	□□□□□ -1.98
LOS1	YKL205W	SVP26	P38869	228 aa		2.68	□□□□□ -1.98
LOS1	YKL205W	YEL067C	P39978	195 aa		2.68	□□□□□ -1.98
LOS1	YKL205W	LSO2	Q3E772	92 aa	Known RBP	2.68	□□□□□ -1.98
LOS1	YKL205W	YDL022C-A	P0C5L6	82 aa		2.68	□□□□□ -1.98
LOS1	YKL205W	HMRA2	P0CY13	119 aa		2.68	□□□□□ -1.98
LOS1	YKL205W	DUT1	P33317	147 aa		2.67	□□□□□ -1.98
LOS1	YKL205W	HUA1	P40325	198 aa		2.67	□□□□□ -1.98
LOS1	YKL205W	YPR170W-B	P0C5R9	85 aa		2.67	□□□□□ -1.98
LOS1	YKL205W	YIL059C	P40520	121 aa		2.67	□□□□□ -1.98
LOS1	YKL205W	GAT4	P40569	121 aa		2.67	□□□□□ -1.98
LOS1	YKL205W	YLR236C	A0A023PZG4	107 aa		2.67	□□□□□ -1.98
LOS1	YKL205W	YMR295C	Q03559	197 aa		2.67	□□□□□ -1.98
LOS1	YKL205W	SAE3	P89114	91 aa		2.66	□□□□□ -1.98
LOS1	YKL205W	URA2	P07259	2214 aa	Known RBP	2.66	□□□□□ -1.98
LOS1	YKL205W	UBC4	P15731	148 aa		2.66	□□□□□ -1.98
LOS1	YKL205W	FUN14	P18411	198 aa		2.66	□□□□□ -1.98
LOS1	YKL205W	EOS1	P53938	366 aa		2.66	□□□□□ -1.98
LOS1	YKL205W	ARO2	P28777	376 aa	Known RBP	2.65	□□□□□ -1.98
LOS1	YKL205W	MSL1	P40567	111 aa	Predicted RBP	2.65	□□□□□ -1.98
LOS1	YKL205W	YML079W	Q03629	201 aa		2.65	□□□□□ -1.99
LOS1	YKL205W	CWP2	P43497	92 aa		2.65	□□□□□ -1.99
LOS1	YKL205W	YPR014C	Q6B0W2	109 aa		2.64	□□□□□ -1.99
LOS1	YKL205W	RPL32	P38061	130 aa	Known RBP	2.64	□□□□□ -1.99
LOS1	YKL205W	VTC1	P40046	129 aa	RIP-Chip data	2.64	□□□□□ -1.99	RIP-Chip
LOS1	YKL205W	ICY1	Q04329	127 aa		2.64	□□□□□ -1.99
LOS1	YKL205W	YCR001W	P25347	104 aa		2.63	□□□□□ -1.99
LOS1	YKL205W	UGX2	P32772	223 aa		2.63	□□□□□ -1.99
LOS1	YKL205W	RGM1	Q00453	211 aa		2.63	□□□□□ -1.99
LOS1	YKL205W	COX10	P21592	462 aa		2.63	□□□□□ -1.99
LOS1	YKL205W	CIN5	P40917	295 aa		2.63	□□□□□ -1.99
LOS1	YKL205W	CWC27	Q02770	301 aa		2.63	□□□□□ -1.99
LOS1	YKL205W	YIL102C-A	Q2V2P5	75 aa		2.63	□□□□□ -1.99
LOS1	YKL205W	YFL019C	P43576	117 aa		2.63	□□□□□ -1.99
LOS1	YKL205W	SFT1	P43682	97 aa		2.63	□□□□□ -1.99
LOS1	YKL205W	YLR363W-A	Q3E747	85 aa		2.63	□□□□□ -1.99
LOS1	YKL205W	SCS22	Q6Q595	175 aa		2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms