RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT1	YFL038C	SIM1	P40472	476 aa		4.95	□□□□□ -1.62
YPT1	YFL038C	YJR146W	P47174	117 aa		4.95	□□□□□ -1.62
YPT1	YFL038C	SCW10	Q04951	389 aa		4.95	□□□□□ -1.62
YPT1	YFL038C	IGO2	Q9P305	131 aa		4.95	□□□□□ -1.62
YPT1	YFL038C	MEC1	P38111	2368 aa		4.95	□□□□□ -1.62
YPT1	YFL038C	RPS8A	P0CX39	200 aa	Known RBP	4.94	□□□□□ -1.62
YPT1	YFL038C	RPS8B	P0CX40	200 aa	Known RBP	4.94	□□□□□ -1.62
YPT1	YFL038C	AIM29	P36154	155 aa		4.94	□□□□□ -1.62
YPT1	YFL038C	YCR041W	P37265	110 aa		4.94	□□□□□ -1.62
YPT1	YFL038C	OXA1	P39952	402 aa		4.94	□□□□□ -1.62
YPT1	YFL038C	YCH1	P42937	148 aa		4.94	□□□□□ -1.62
YPT1	YFL038C	AIM11	P87275	137 aa		4.94	□□□□□ -1.62
YPT1	YFL038C	YLR042C	Q07990	161 aa		4.94	□□□□□ -1.62
YPT1	YFL038C	TRP1	P00912	224 aa		4.93	□□□□□ -1.62
YPT1	YFL038C	CPR1	P14832	162 aa	Known RBP	4.93	□□□□□ -1.62
YPT1	YFL038C	RPL16A	P26784	199 aa	Known RBP	4.93	□□□□□ -1.62
YPT1	YFL038C	RRT13	P40042	185 aa		4.93	□□□□□ -1.62
YPT1	YFL038C	FIP1	P45976	327 aa		4.93	□□□□□ -1.62
YPT1	YFL038C	TAR1	Q8TGM6	124 aa		4.93	□□□□□ -1.62
YPT1	YFL038C	YLR194C	Q05777	254 aa		4.92	□□□□□ -1.62
YPT1	YFL038C	MSA1	Q08471	629 aa		4.92	□□□□□ -1.62
YPT1	YFL038C	YOR097C	Q12274	175 aa	Predicted RBP	4.92	□□□□□ -1.62
YPT1	YFL038C	ATP15	P21306	62 aa		4.91	□□□□□ -1.62
YPT1	YFL038C	POP7	P38291	140 aa		4.91	□□□□□ -1.62
YPT1	YFL038C	YFR035C	P43608	114 aa		4.91	□□□□□ -1.62
YPT1	YFL038C	YFR057W	P43625	151 aa		4.91	□□□□□ -1.62
YPT1	YFL038C	ALG13	P53178	202 aa		4.91	□□□□□ -1.62
YPT1	YFL038C	RUB1	Q03919	77 aa		4.91	□□□□□ -1.62
YPT1	YFL038C	ARO2	P28777	376 aa	Known RBP	4.9	□□□□□ -1.63
YPT1	YFL038C	VTC1	P40046	129 aa	RIP-Chip data	4.9	□□□□□ -1.63	not detected
YPT1	YFL038C	VHS2	P40463	436 aa		4.9	□□□□□ -1.63
YPT1	YFL038C	AGE2	P40529	298 aa		4.9	□□□□□ -1.63
YPT1	YFL038C	CIN5	P40917	295 aa		4.9	□□□□□ -1.63
YPT1	YFL038C	ADH1	P00330	348 aa	Known RBP	4.89	□□□□□ -1.63
YPT1	YFL038C	RPL2A	P0CX45	254 aa	Known RBP	4.89	□□□□□ -1.63
YPT1	YFL038C	RPL2B	P0CX46	254 aa	Known RBP	4.89	□□□□□ -1.63
YPT1	YFL038C	RPS11A	P0CX47	156 aa	Known RBP	4.89	□□□□□ -1.63
YPT1	YFL038C	RPS11B	P0CX48	156 aa	Known RBP	4.89	□□□□□ -1.63
YPT1	YFL038C	YHR212W-A	P0CX91	67 aa		4.89	□□□□□ -1.63
YPT1	YFL038C	YPT53	P36019	220 aa		4.89	□□□□□ -1.63
YPT1	YFL038C	PEX17	P40155	199 aa		4.89	□□□□□ -1.63
YPT1	YFL038C	YIL002W-A	Q3E7Z5	69 aa		4.89	□□□□□ -1.63
YPT1	YFL038C	MPC2	P38857	129 aa		4.88	□□□□□ -1.63
YPT1	YFL038C	YER085C	P40058	173 aa		4.88	□□□□□ -1.63
YPT1	YFL038C	MRPS12	P53732	153 aa		4.88	□□□□□ -1.63
YPT1	YFL038C	LSM6	Q06406	86 aa	Known RBP	4.88	□□□□□ -1.63
YPT1	YFL038C	YPL257W	Q08974	193 aa		4.88	□□□□□ -1.63
YPT1	YFL038C	TOR1	P35169	2470 aa		4.88	□□□□□ -1.63
YPT1	YFL038C	DUT1	P33317	147 aa		4.87	□□□□□ -1.63
YPT1	YFL038C	CYC7	P00045	113 aa		4.86	□□□□□ -1.63
YPT1	YFL038C	UBC5	P15732	148 aa		4.86	□□□□□ -1.63
YPT1	YFL038C	NHP2	P32495	156 aa	Predicted RBP	4.86	□□□□□ -1.63
YPT1	YFL038C	UGX2	P32772	223 aa		4.86	□□□□□ -1.63
YPT1	YFL038C	SHU1	P38751	150 aa		4.86	□□□□□ -1.63
YPT1	YFL038C	YEL008W	P40001	126 aa		4.86	□□□□□ -1.63
YPT1	YFL038C	PMP3	P87284	55 aa		4.86	□□□□□ -1.63
YPT1	YFL038C	QCR8	P08525	94 aa		4.85	□□□□□ -1.63
YPT1	YFL038C	RPL18A	P0CX49	186 aa	Known RBP	4.85	□□□□□ -1.63
YPT1	YFL038C	RPL18B	P0CX50	186 aa	Known RBP	4.85	□□□□□ -1.63
YPT1	YFL038C	SLO1	Q3E784	85 aa		4.85	□□□□□ -1.63
YPT1	YFL038C	RPL28	P02406	149 aa	Known RBP	4.84	□□□□□ -1.63
YPT1	YFL038C	CDC43	P18898	376 aa		4.84	□□□□□ -1.63
YPT1	YFL038C	YBR209W	P38311	105 aa		4.84	□□□□□ -1.63
YPT1	YFL038C	SOH1	P38633	127 aa		4.84	□□□□□ -1.63
YPT1	YFL038C	YPS5	P53057	165 aa		4.84	□□□□□ -1.63
YPT1	YFL038C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
YPT1	YFL038C	YBR126W-A	Q8TGU7	68 aa		4.84	□□□□□ -1.63
YPT1	YFL038C	YCL021W-A	Q96VH3	125 aa		4.84	□□□□□ -1.63
YPT1	YFL038C	YBR144C	P34215	104 aa		4.83	□□□□□ -1.64
YPT1	YFL038C	KRE9	P39005	276 aa		4.83	□□□□□ -1.64
YPT1	YFL038C	YGL088W	P53151	121 aa		4.83	□□□□□ -1.64
YPT1	YFL038C	YAR029W	P39549	74 aa		4.82	□□□□□ -1.64
YPT1	YFL038C	YNL190W	P53872	204 aa		4.82	□□□□□ -1.64
YPT1	YFL038C	HPA2	Q06592	156 aa		4.82	□□□□□ -1.64
YPT1	YFL038C	MET32	Q12041	191 aa		4.82	□□□□□ -1.64
YPT1	YFL038C	MSN1	P22148	382 aa		4.81	□□□□□ -1.64
YPT1	YFL038C	YIL059C	P40520	121 aa		4.81	□□□□□ -1.64
YPT1	YFL038C	YDL186W	P48568	277 aa		4.81	□□□□□ -1.64
YPT1	YFL038C	YDR274C	P87283	123 aa		4.81	□□□□□ -1.64
YPT1	YFL038C	YCR075W-A	Q3E830	75 aa		4.81	□□□□□ -1.64
YPT1	YFL038C	MID2	P36027	376 aa		4.8	□□□□□ -1.64
YPT1	YFL038C	NRG2	P38082	220 aa		4.8	□□□□□ -1.64
YPT1	YFL038C	ARC15	P40518	154 aa	RIP-Chip data	4.8	□□□□□ -1.64	not detected
YPT1	YFL038C	OST2	P46964	130 aa		4.8	□□□□□ -1.64
YPT1	YFL038C	YGR240C-A	Q3E786	66 aa		4.8	□□□□□ -1.64
YPT1	YFL038C	ATX1	P38636	73 aa		4.79	□□□□□ -1.64
YPT1	YFL038C	YHR130C	P38834	111 aa		4.79	□□□□□ -1.64
YPT1	YFL038C	YMR122W-A	Q3E842	84 aa		4.79	□□□□□ -1.64
YPT1	YFL038C	COX14	P39103	70 aa		4.78	□□□□□ -1.64
YPT1	YFL038C	EOS1	P53938	366 aa		4.78	□□□□□ -1.64
YPT1	YFL038C	YMR295C	Q03559	197 aa		4.78	□□□□□ -1.64
YPT1	YFL038C	PPT2	Q12036	173 aa		4.78	□□□□□ -1.64
YPT1	YFL038C	YGR035W-A	Q45U48	73 aa		4.78	□□□□□ -1.64
YPT1	YFL038C	COX10	P21592	462 aa		4.77	□□□□□ -1.65
YPT1	YFL038C	ERI1	P62651	68 aa	Known RBP	4.77	□□□□□ -1.65
YPT1	YFL038C	COX12	Q01519	83 aa		4.77	□□□□□ -1.65
YPT1	YFL038C	MLF3	P32047	452 aa		4.76	□□□□□ -1.65
YPT1	YFL038C	TOA2	P32774	122 aa		4.76	□□□□□ -1.65
YPT1	YFL038C	YBR219C	P38317	127 aa		4.76	□□□□□ -1.65
YPT1	YFL038C	YIA6	P40556	373 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms