RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	YKR032W	P36127	104 aa		4.76	□□□□□ -1.65
VMA3	YEL027W	SEC72	P39742	193 aa	Known RBP	4.76	□□□□□ -1.65
VMA3	YEL027W	YLR050C	Q12155	161 aa	Known RBP	4.76	□□□□□ -1.65
VMA3	YEL027W	PAI3	P01094	68 aa		4.75	□□□□□ -1.65
VMA3	YEL027W	YKR070W	P36151	352 aa	Known RBP	4.75	□□□□□ -1.65
VMA3	YEL027W	YPS5	P53057	165 aa		4.75	□□□□□ -1.65
VMA3	YEL027W	SGF11	Q03067	99 aa		4.75	□□□□□ -1.65
VMA3	YEL027W	YLR042C	Q07990	161 aa		4.75	□□□□□ -1.65
VMA3	YEL027W	ANB1	P19211	157 aa		4.74	□□□□□ -1.65
VMA3	YEL027W	PET8	P38921	284 aa		4.74	□□□□□ -1.65
VMA3	YEL027W	YNL200C	P40165	246 aa	Known RBP	4.74	□□□□□ -1.65
VMA3	YEL027W	YNL198C	P40166	100 aa		4.74	□□□□□ -1.65
VMA3	YEL027W	YLR363W-A	Q3E747	85 aa		4.74	□□□□□ -1.65
VMA3	YEL027W	SLO1	Q3E784	85 aa		4.74	□□□□□ -1.65
VMA3	YEL027W	YGR240C-A	Q3E786	66 aa		4.74	□□□□□ -1.65
VMA3	YEL027W	YCR023C	P25351	611 aa		4.73	□□□□□ -1.65
VMA3	YEL027W	YNL217W	P40152	326 aa		4.73	□□□□□ -1.65
VMA3	YEL027W	ATP23	P53722	227 aa		4.73	□□□□□ -1.65
VMA3	YEL027W	MGR2	Q02889	113 aa		4.73	□□□□□ -1.65
VMA3	YEL027W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
VMA3	YEL027W	PFY1	P07274	126 aa		4.72	□□□□□ -1.65
VMA3	YEL027W	DCV1	P43595	202 aa		4.72	□□□□□ -1.65
VMA3	YEL027W	POP3	P53833	195 aa	Predicted RBP	4.72	□□□□□ -1.65
VMA3	YEL027W	HAL1	Q01766	294 aa		4.72	□□□□□ -1.65
VMA3	YEL027W	YIL014C-A	Q02598	104 aa		4.72	□□□□□ -1.65
VMA3	YEL027W	BET5	Q03630	159 aa		4.72	□□□□□ -1.65
VMA3	YEL027W	DPP1	Q05521	289 aa		4.72	□□□□□ -1.65
VMA3	YEL027W	ISU2	Q12056	156 aa		4.72	□□□□□ -1.65
VMA3	YEL027W	HTL1	Q9URQ5	78 aa		4.72	□□□□□ -1.65
VMA3	YEL027W	YPT53	P36019	220 aa		4.71	□□□□□ -1.66
VMA3	YEL027W	KRE9	P39005	276 aa		4.71	□□□□□ -1.66
VMA3	YEL027W	YER076C	P40049	302 aa		4.71	□□□□□ -1.66
VMA3	YEL027W	GLO1	P50107	326 aa		4.71	□□□□□ -1.66
VMA3	YEL027W	DGA1	Q08650	418 aa		4.71	□□□□□ -1.66
VMA3	YEL027W	PMP3	P87284	55 aa		4.7	□□□□□ -1.66
VMA3	YEL027W	FCF1	Q05498	189 aa	Predicted RBP	4.7	□□□□□ -1.66
VMA3	YEL027W	TOS6	P48560	102 aa		4.69	□□□□□ -1.66
VMA3	YEL027W	YML079W	Q03629	201 aa		4.69	□□□□□ -1.66
VMA3	YEL027W	YIL102C-A	Q2V2P5	75 aa		4.69	□□□□□ -1.66
VMA3	YEL027W	ADH1	P00330	348 aa	Known RBP	4.68	□□□□□ -1.66
VMA3	YEL027W	AQY1	P0CD91	305 aa		4.68	□□□□□ -1.66
VMA3	YEL027W	UBC5	P15732	148 aa		4.68	□□□□□ -1.66
VMA3	YEL027W	HYP2	P23301	157 aa	Known RBP	4.68	□□□□□ -1.66
VMA3	YEL027W	PCL2	P25693	308 aa		4.68	□□□□□ -1.66
VMA3	YEL027W	YDR042C	Q03205	200 aa		4.68	□□□□□ -1.66
VMA3	YEL027W	CRC1	Q12289	327 aa		4.68	□□□□□ -1.66
VMA3	YEL027W	YOR008C-A	Q3E7B9	74 aa		4.68	□□□□□ -1.66
VMA3	YEL027W	RPP2A	P05319	106 aa	Known RBP	4.66	□□□□□ -1.66
VMA3	YEL027W	RPL27B	P0C2H7	136 aa	Known RBP	4.66	□□□□□ -1.66
VMA3	YEL027W	ERI1	P62651	68 aa	Known RBP	4.66	□□□□□ -1.66
VMA3	YEL027W	CDC43	P18898	376 aa		4.65	□□□□□ -1.67
VMA3	YEL027W	RPL16A	P26784	199 aa	Known RBP	4.65	□□□□□ -1.67
VMA3	YEL027W	SPC1	P46965	94 aa		4.65	□□□□□ -1.67
VMA3	YEL027W	YJR146W	P47174	117 aa		4.65	□□□□□ -1.67
VMA3	YEL027W	YLR296W	Q05898	108 aa		4.65	□□□□□ -1.67
VMA3	YEL027W	YMR122W-A	Q3E842	84 aa		4.65	□□□□□ -1.67
VMA3	YEL027W	TRP1	P00912	224 aa		4.64	□□□□□ -1.67
VMA3	YEL027W	ARC15	P40518	154 aa	RIP-Chip data	4.64	□□□□□ -1.67	not detected
VMA3	YEL027W	URM1	P40554	99 aa	Predicted RBP	4.64	□□□□□ -1.67
VMA3	YEL027W	DFM1	Q12743	341 aa	Known RBP	4.64	□□□□□ -1.67
VMA3	YEL027W	HMRA2	P0CY13	119 aa		4.63	□□□□□ -1.67
VMA3	YEL027W	APS1	P35181	156 aa		4.63	□□□□□ -1.67
VMA3	YEL027W	YKL044W	P36092	106 aa		4.63	□□□□□ -1.67
VMA3	YEL027W	YBR209W	P38311	105 aa		4.63	□□□□□ -1.67
VMA3	YEL027W	YIL059C	P40520	121 aa		4.63	□□□□□ -1.67
VMA3	YEL027W	RPR2	P40571	144 aa		4.63	□□□□□ -1.67
VMA3	YEL027W	YLR112W	Q12130	139 aa		4.63	□□□□□ -1.67
VMA3	YEL027W	COA3	Q3E7B2	85 aa		4.63	□□□□□ -1.67
VMA3	YEL027W	YGL088W	P53151	121 aa		4.62	□□□□□ -1.67
VMA3	YEL027W	YNL184C	P53876	108 aa		4.62	□□□□□ -1.67
VMA3	YEL027W	YMR103C	Q04436	120 aa		4.62	□□□□□ -1.67
VMA3	YEL027W	NUP42	P49686	430 aa	Known RBP	4.61	□□□□□ -1.67
VMA3	YEL027W	ELC1	Q03071	99 aa		4.61	□□□□□ -1.67
VMA3	YEL027W	YKL023C-A	Q2V2P3	75 aa		4.61	□□□□□ -1.67
VMA3	YEL027W	YCL021W-A	Q96VH3	125 aa		4.61	□□□□□ -1.67
VMA3	YEL027W	YPR010C-A	A5Z2X5	72 aa		4.6	□□□□□ -1.67
VMA3	YEL027W	RPL33A	P05744	107 aa	Known RBP	4.6	□□□□□ -1.67
VMA3	YEL027W	INO4	P13902	151 aa		4.6	□□□□□ -1.67
VMA3	YEL027W	DUT1	P33317	147 aa		4.6	□□□□□ -1.67
VMA3	YEL027W	YEL008W	P40001	126 aa		4.6	□□□□□ -1.67
VMA3	YEL027W	RPL33B	P41056	107 aa	Known RBP	4.6	□□□□□ -1.67
VMA3	YEL027W	YKL070W	P36087	169 aa		4.59	□□□□□ -1.67
VMA3	YEL027W	ERG28	P40030	148 aa		4.59	□□□□□ -1.67
VMA3	YEL027W	YPL073C	P40323	161 aa		4.59	□□□□□ -1.67
VMA3	YEL027W	YAR1	P46683	200 aa		4.59	□□□□□ -1.67
VMA3	YEL027W	YKL069W	P36088	180 aa		4.58	□□□□□ -1.68
VMA3	YEL027W	ATX1	P38636	73 aa		4.58	□□□□□ -1.68
VMA3	YEL027W	OST2	P46964	130 aa		4.58	□□□□□ -1.68
VMA3	YEL027W	PBA1	Q05778	276 aa		4.58	□□□□□ -1.68
VMA3	YEL027W	ISD11	Q6Q560	94 aa		4.58	□□□□□ -1.68
VMA3	YEL027W	YLL066W-B	Q8TGJ7	56 aa		4.58	□□□□□ -1.68
VMA3	YEL027W	RTC6	O14464	93 aa		4.57	□□□□□ -1.68
VMA3	YEL027W	YOR304C-A	O14468	76 aa		4.57	□□□□□ -1.68
VMA3	YEL027W	ATP15	P21306	62 aa		4.57	□□□□□ -1.68
VMA3	YEL027W	COX10	P21592	462 aa		4.57	□□□□□ -1.68
VMA3	YEL027W	YKR041W	P36134	250 aa		4.57	□□□□□ -1.68
VMA3	YEL027W	YAR029W	P39549	74 aa		4.57	□□□□□ -1.68
VMA3	YEL027W	YER085C	P40058	173 aa		4.57	□□□□□ -1.68
VMA3	YEL027W	YMR320W	Q04897	101 aa		4.57	□□□□□ -1.68
VMA3	YEL027W	NHP2	P32495	156 aa	Predicted RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms