RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	YMR103C	Q04436	120 aa		3.56	□□□□□ -1.84
SUP35	YDR172W	FCF1	Q05498	189 aa	Predicted RBP	3.56	□□□□□ -1.84
SUP35	YDR172W	YOR304C-A	O14468	76 aa		3.56	□□□□□ -1.84
SUP35	YDR172W	VAR1	P02381	398 aa		3.56	□□□□□ -1.84
SUP35	YDR172W	KEG1	P43614	200 aa		3.56	□□□□□ -1.84
SUP35	YDR172W	GLO1	P50107	326 aa		3.56	□□□□□ -1.84
SUP35	YDR172W	YMR244W	Q04018	355 aa		3.56	□□□□□ -1.84
SUP35	YDR172W	MSA1	Q08471	629 aa		3.56	□□□□□ -1.84
SUP35	YDR172W	Q0255	P03881	472 aa		3.55	□□□□□ -1.84
SUP35	YDR172W	HMRA2	P0CY13	119 aa		3.55	□□□□□ -1.84
SUP35	YDR172W	YDL022C-A	P0C5L6	82 aa		3.55	□□□□□ -1.84
SUP35	YDR172W	RPL16B	P26785	198 aa	Known RBP	3.55	□□□□□ -1.84
SUP35	YDR172W	PRY2	P36110	329 aa		3.55	□□□□□ -1.84
SUP35	YDR172W	MIC26	P50087	233 aa		3.55	□□□□□ -1.84
SUP35	YDR172W	YHR212W-A	P0CX91	67 aa		3.54	□□□□□ -1.84
SUP35	YDR172W	CPR1	P14832	162 aa	Known RBP	3.54	□□□□□ -1.84
SUP35	YDR172W	SLO1	Q3E784	85 aa		3.54	□□□□□ -1.84
SUP35	YDR172W	COA3	Q3E7B2	85 aa		3.54	□□□□□ -1.84
SUP35	YDR172W	YGR035W-A	Q45U48	73 aa		3.54	□□□□□ -1.84
SUP35	YDR172W	RPL42A	P0CX27	106 aa	Known RBP	3.53	□□□□□ -1.84
SUP35	YDR172W	RPL42B	P0CX28	106 aa	Known RBP	3.53	□□□□□ -1.84
SUP35	YDR172W	YPT53	P36019	220 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	ECM33	P38248	429 aa	Known RBP	3.53	□□□□□ -1.84
SUP35	YDR172W	RPF1	P38805	295 aa	Known RBP	3.53	□□□□□ -1.84
SUP35	YDR172W	DCV1	P43595	202 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	TOS6	P48560	102 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	MRPS8	Q03799	155 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	YPL261C	Q08976	102 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	YPR170W-B	P0C5R9	85 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	YKL044W	P36092	106 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	YEL067C	P39978	195 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	RRT13	P40042	185 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	YLR042C	Q07990	161 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	YLR363W-A	Q3E747	85 aa		3.53	□□□□□ -1.84
SUP35	YDR172W	MBF1	O14467	151 aa	Known RBP	3.52	□□□□□ -1.85
SUP35	YDR172W	YBR144C	P34215	104 aa		3.52	□□□□□ -1.85
SUP35	YDR172W	YKL070W	P36087	169 aa		3.52	□□□□□ -1.85
SUP35	YDR172W	YPL073C	P40323	161 aa		3.52	□□□□□ -1.85
SUP35	YDR172W	ALG13	P53178	202 aa		3.52	□□□□□ -1.85
SUP35	YDR172W	YOR008C-A	Q3E7B9	74 aa		3.52	□□□□□ -1.85
SUP35	YDR172W	VHS2	P40463	436 aa		3.51	□□□□□ -1.85
SUP35	YDR172W	AIM34	Q03673	198 aa		3.51	□□□□□ -1.85
SUP35	YDR172W	ARO2	P28777	376 aa	Known RBP	3.51	□□□□□ -1.85
SUP35	YDR172W	UGX2	P32772	223 aa		3.51	□□□□□ -1.85
SUP35	YDR172W	MPC2	P38857	129 aa		3.51	□□□□□ -1.85
SUP35	YDR172W	YFR057W	P43625	151 aa		3.51	□□□□□ -1.85
SUP35	YDR172W	ATP15	P21306	62 aa		3.5	□□□□□ -1.85
SUP35	YDR172W	RPL16A	P26784	199 aa	Known RBP	3.5	□□□□□ -1.85
SUP35	YDR172W	YJR146W	P47174	117 aa		3.5	□□□□□ -1.85
SUP35	YDR172W	YNR077C	P53758	84 aa		3.5	□□□□□ -1.85
SUP35	YDR172W	MRP49	P32388	137 aa		3.5	□□□□□ -1.85
SUP35	YDR172W	YGL088W	P53151	121 aa		3.5	□□□□□ -1.85
SUP35	YDR172W	YKR041W	P36134	250 aa		3.49	□□□□□ -1.85
SUP35	YDR172W	RPL32	P38061	130 aa	Known RBP	3.49	□□□□□ -1.85
SUP35	YDR172W	YBR209W	P38311	105 aa		3.49	□□□□□ -1.85
SUP35	YDR172W	VTC1	P40046	129 aa	RIP-Chip data	3.49	□□□□□ -1.85	not detected
SUP35	YDR172W	YNL198C	P40166	100 aa		3.49	□□□□□ -1.85
SUP35	YDR172W	AIM11	P87275	137 aa		3.49	□□□□□ -1.85
SUP35	YDR172W	YLR361C-A	Q3E795	98 aa		3.49	□□□□□ -1.85
SUP35	YDR172W	ELC1	Q03071	99 aa		3.48	□□□□□ -1.85
SUP35	YDR172W	RPS11A	P0CX47	156 aa	Known RBP	3.48	□□□□□ -1.85
SUP35	YDR172W	RPS11B	P0CX48	156 aa	Known RBP	3.48	□□□□□ -1.85
SUP35	YDR172W	OXA1	P39952	402 aa		3.48	□□□□□ -1.85
SUP35	YDR172W	YDR274C	P87283	123 aa		3.48	□□□□□ -1.85
SUP35	YDR172W	YML079W	Q03629	201 aa		3.48	□□□□□ -1.85
SUP35	YDR172W	YCR075W-A	Q3E830	75 aa		3.48	□□□□□ -1.85
SUP35	YDR172W	RPS8A	P0CX39	200 aa	Known RBP	3.47	□□□□□ -1.85
SUP35	YDR172W	RPS8B	P0CX40	200 aa	Known RBP	3.47	□□□□□ -1.85
SUP35	YDR172W	RPL2A	P0CX45	254 aa	Known RBP	3.47	□□□□□ -1.85
SUP35	YDR172W	RPL2B	P0CX46	254 aa	Known RBP	3.47	□□□□□ -1.85
SUP35	YDR172W	YNL162W-A	Q3E7A8	72 aa		3.47	□□□□□ -1.85
SUP35	YDR172W	YER085C	P40058	173 aa		3.47	□□□□□ -1.85
SUP35	YDR172W	YNL217W	P40152	326 aa		3.47	□□□□□ -1.85
SUP35	YDR172W	MID2	P36027	376 aa		3.46	□□□□□ -1.86
SUP35	YDR172W	YCH1	P42937	148 aa		3.46	□□□□□ -1.86
SUP35	YDR172W	TRP1	P00912	224 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	YEL008W	P40001	126 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	MRPS12	P53732	153 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	YIL102C-A	Q2V2P5	75 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	IGO2	Q9P305	131 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	RPL28	P02406	149 aa	Known RBP	3.45	□□□□□ -1.86
SUP35	YDR172W	YCR001W	P25347	104 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	KRE9	P39005	276 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	YIL059C	P40520	121 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	YNL190W	P53872	204 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	SCW10	Q04951	389 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	YLR194C	Q05777	254 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	YLR296W	Q05898	108 aa		3.45	□□□□□ -1.86
SUP35	YDR172W	UBC5	P15732	148 aa		3.44	□□□□□ -1.86
SUP35	YDR172W	YPS5	P53057	165 aa		3.44	□□□□□ -1.86
SUP35	YDR172W	YIR021W-A	Q3E739	70 aa		3.44	□□□□□ -1.86
SUP35	YDR172W	PAI3	P01094	68 aa		3.43	□□□□□ -1.86
SUP35	YDR172W	RPL18A	P0CX49	186 aa	Known RBP	3.43	□□□□□ -1.86
SUP35	YDR172W	RPL18B	P0CX50	186 aa	Known RBP	3.43	□□□□□ -1.86
SUP35	YDR172W	HYP2	P23301	157 aa	Known RBP	3.43	□□□□□ -1.86
SUP35	YDR172W	YER181C	P40097	107 aa		3.43	□□□□□ -1.86
SUP35	YDR172W	PMP3	P87284	55 aa		3.43	□□□□□ -1.86
SUP35	YDR172W	COX12	Q01519	83 aa		3.43	□□□□□ -1.86
SUP35	YDR172W	YCL021W-A	Q96VH3	125 aa		3.43	□□□□□ -1.86
SUP35	YDR172W	TOA2	P32774	122 aa		3.43	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms