RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W YLR281CQ05863 155 aa7.08□□□□□ -1.28
SED1YDR077W YLR112WQ12130 139 aa7.08□□□□□ -1.28
SED1YDR077W COA3Q3E7B2 85 aa7.07□□□□□ -1.28
SED1YDR077W PMP3P87284 55 aa7.06□□□□□ -1.28
SED1YDR077W BET5Q03630 159 aa7.06□□□□□ -1.28
SED1YDR077W DYN1P36022 4092 aa7.06□□□□□ -1.28
SED1YDR077W YCR001WP25347 104 aa7.05□□□□□ -1.28
SED1YDR077W RPL16AP26784 199 aaKnown RBP7.05□□□□□ -1.28
SED1YDR077W YKL044WP36092 106 aa7.05□□□□□ -1.28
SED1YDR077W PAU23Q07987 124 aa7.05□□□□□ -1.28
SED1YDR077W YLR122CQ12312 125 aa7.05□□□□□ -1.28
SED1YDR077W PAU17Q12370 124 aa7.05□□□□□ -1.28
SED1YDR077W YKL070WP36087 169 aa7.04□□□□□ -1.28
SED1YDR077W KRE9P39005 276 aa7.04□□□□□ -1.28
SED1YDR077W GLC8P41818 229 aa7.04□□□□□ -1.28
SED1YDR077W YJR146WP47174 117 aa7.04□□□□□ -1.28
SED1YDR077W ADH2P00331 348 aaKnown RBP7.03□□□□□ -1.28
SED1YDR077W YGR240C-AQ3E786 66 aa7.03□□□□□ -1.28
SED1YDR077W TRP1P00912 224 aa7.02□□□□□ -1.29
SED1YDR077W UBC5P15732 148 aa7.02□□□□□ -1.29
SED1YDR077W YBR209WP38311 105 aa7.02□□□□□ -1.29
SED1YDR077W SGF11Q03067 99 aa7.02□□□□□ -1.29
SED1YDR077W VAM10Q08474 114 aa7.02□□□□□ -1.29
SED1YDR077W AIM29P36154 155 aa7.01□□□□□ -1.29
SED1YDR077W RPL31AP0C2H8 113 aaKnown RBP7□□□□□ -1.29
SED1YDR077W MRP49P32388 137 aa7□□□□□ -1.29
SED1YDR077W YPT53P36019 220 aa7□□□□□ -1.29
SED1YDR077W RPL32P38061 130 aaKnown RBP7□□□□□ -1.29
SED1YDR077W NRG2P38082 220 aa7□□□□□ -1.29
SED1YDR077W YIL059CP40520 121 aa7□□□□□ -1.29
SED1YDR077W YPL073CP40323 161 aa6.99□□□□□ -1.29
SED1YDR077W CWC27Q02770 301 aa6.99□□□□□ -1.29
SED1YDR077W YPL261CQ08976 102 aa6.99□□□□□ -1.29
SED1YDR077W DFM1Q12743 341 aaKnown RBP6.99□□□□□ -1.29
SED1YDR077W HAP3P13434 144 aa6.98□□□□□ -1.29
SED1YDR077W ARC15P40518 154 aaRIP-Chip data6.98□□□□□ -1.29not detected
SED1YDR077W YGL088WP53151 121 aa6.98□□□□□ -1.29
SED1YDR077W ERI1P62651 68 aaKnown RBP6.98□□□□□ -1.29
SED1YDR077W AIM11P87275 137 aa6.98□□□□□ -1.29
SED1YDR077W SCW10Q04951 389 aa6.98□□□□□ -1.29
SED1YDR077W ATP15P21306 62 aa6.97□□□□□ -1.29
SED1YDR077W CRC1Q12289 327 aa6.97□□□□□ -1.29
SED1YDR077W YCL021W-AQ96VH3 125 aa6.97□□□□□ -1.29
SED1YDR077W YML079WQ03629 201 aa6.96□□□□□ -1.3
SED1YDR077W YEL008WP40001 126 aa6.95□□□□□ -1.3
SED1YDR077W YLR363W-AQ3E747 85 aa6.95□□□□□ -1.3
SED1YDR077W YMR122W-AQ3E842 84 aa6.95□□□□□ -1.3
SED1YDR077W YKR041WP36134 250 aa6.94□□□□□ -1.3
SED1YDR077W RPF1P38805 295 aaKnown RBP6.94□□□□□ -1.3
SED1YDR077W YAR029WP39549 74 aa6.94□□□□□ -1.3
SED1YDR077W RDS3Q06835 107 aaPredicted RBP6.94□□□□□ -1.3
SED1YDR077W RPS8AP0CX39 200 aaKnown RBP6.93□□□□□ -1.3
SED1YDR077W RPS8BP0CX40 200 aaKnown RBP6.93□□□□□ -1.3
SED1YDR077W HAL1Q01766 294 aa6.93□□□□□ -1.3
SED1YDR077W YER085CP40058 173 aa6.92□□□□□ -1.3
SED1YDR077W YDL022C-AP0C5L6 82 aa6.91□□□□□ -1.3
SED1YDR077W PEX17P40155 199 aa6.91□□□□□ -1.3
SED1YDR077W YLR194CQ05777 254 aa6.91□□□□□ -1.3
SED1YDR077W MHR1Q06630 226 aa6.91□□□□□ -1.3
SED1YDR077W IGO2Q9P305 131 aa6.91□□□□□ -1.3
SED1YDR077W RPL18AP0CX49 186 aaKnown RBP6.9□□□□□ -1.3
SED1YDR077W RPL18BP0CX50 186 aaKnown RBP6.9□□□□□ -1.3
SED1YDR077W AUA1P32450 94 aa6.9□□□□□ -1.3
SED1YDR077W UIP3P39547 235 aa6.9□□□□□ -1.3
SED1YDR077W SHU1P38751 150 aa6.89□□□□□ -1.31
SED1YDR077W YEL067CP39978 195 aa6.89□□□□□ -1.31
SED1YDR077W YPR010C-AA5Z2X5 72 aa6.88□□□□□ -1.31
SED1YDR077W YRA2P36036 203 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
SED1YDR077W ELC1Q03071 99 aa6.88□□□□□ -1.31
SED1YDR077W OXA1P39952 402 aa6.87□□□□□ -1.31
SED1YDR077W SPC1P46965 94 aa6.87□□□□□ -1.31
SED1YDR077W PPT2Q12036 173 aa6.87□□□□□ -1.31
SED1YDR077W CIN5P40917 295 aa6.86□□□□□ -1.31
SED1YDR077W YNR077CP53758 84 aa6.86□□□□□ -1.31
SED1YDR077W YMR295CQ03559 197 aa6.86□□□□□ -1.31
SED1YDR077W ENV10Q99382 181 aa6.86□□□□□ -1.31
SED1YDR077W RPL28P02406 149 aaKnown RBP6.85□□□□□ -1.31
SED1YDR077W ERG28P40030 148 aa6.85□□□□□ -1.31
SED1YDR077W QCR8P08525 94 aa6.84□□□□□ -1.31
SED1YDR077W YBR219CP38317 127 aa6.84□□□□□ -1.31
SED1YDR077W VTC1P40046 129 aaRIP-Chip data6.84□□□□□ -1.31not detected
SED1YDR077W PAI3P01094 68 aa6.82□□□□□ -1.32
SED1YDR077W RPL33AP05744 107 aaKnown RBP6.82□□□□□ -1.32
SED1YDR077W RPL33BP41056 107 aaKnown RBP6.82□□□□□ -1.32
SED1YDR077W YFR057WP43625 151 aa6.82□□□□□ -1.32
SED1YDR077W YKL023C-AQ2V2P3 75 aa6.82□□□□□ -1.32
SED1YDR077W ADH1P00330 348 aaKnown RBP6.81□□□□□ -1.32
SED1YDR077W MRPS12P53732 153 aa6.81□□□□□ -1.32
SED1YDR077W UGX2P32772 223 aa6.8□□□□□ -1.32
SED1YDR077W COX14P39103 70 aa6.8□□□□□ -1.32
SED1YDR077W YER181CP40097 107 aa6.8□□□□□ -1.32
SED1YDR077W YMR320WQ04897 101 aa6.8□□□□□ -1.32
SED1YDR077W MBF1O14467 151 aaKnown RBP6.79□□□□□ -1.32
SED1YDR077W YPR170W-BP0C5R9 85 aa6.79□□□□□ -1.32
SED1YDR077W YLR296WQ05898 108 aa6.79□□□□□ -1.32
SED1YDR077W YMR175W-AQ3E766 64 aa6.79□□□□□ -1.32
SED1YDR077W TOA2P32774 122 aa6.78□□□□□ -1.32
SED1YDR077W YNL190WP53872 204 aa6.78□□□□□ -1.32
SED1YDR077W PBA1Q05778 276 aa6.78□□□□□ -1.32
SED1YDR077W YIL102C-AQ2V2P5 75 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms