RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 ITGB3P05106 788 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 CYP11A1P05108 521 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 GLI1P08151 1106 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 KRT5P13647 590 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 FOSL2P15408 326 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 CTNNA2P26232 953 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 POLR2BP30876 1174 aaKnown RBP10.85□□□□□ -0.67
PHGDH-224ENST00000641711 DNA2P51530 1060 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 LILRA4P59901 499 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 SLC7A5Q01650 507 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 BIRC3Q13489 604 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 TRPC3Q13507 836 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 NCOA4Q13772 614 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 CAMK1Q14012 370 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 TERF2Q15554 542 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 ZNF280DQ6N043 979 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 KIAA1841Q6NSI8 718 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 ELMSAN1Q6PJG2 1045 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 CD300LGQ6UXG3 332 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 TMC7Q7Z402 723 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 TMEM86AQ8N2M4 240 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 C3orf58Q8NDZ4 430 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 OR5B17Q8NGF7 314 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 CD101Q93033 1021 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 TCF25Q9BQ70 676 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 VN1R3Q9BXE9 311 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 EMILIN2Q9BXX0 1053 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 GPR62Q9BZJ7 368 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 RXFP1Q9HBX9 757 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 APOBEC3GQ9HC16 384 aaKnown RBP10.85□□□□□ -0.67
PHGDH-224ENST00000641711 ACP6Q9NPH0 428 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 DPP7Q9UHL4 492 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 SIX4Q9UIU6 781 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 BACE2Q9Y5Z0 518 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 KPNA7A9QM74 516 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 H3BQF6 201 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 KRIT1O00522 736 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 RAD51CO43502 376 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 PHACTR2O75167 634 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 HEXIM1O94992 359 aaKnown RBP10.84□□□□□ -0.67
PHGDH-224ENST00000641711 ADH1AP07327 375 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 SRGAP2BP0DMP2 458 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 P4HA1P13674 534 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 ZNF132P52740 706 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 NOP14P78316 857 aaKnown RBP10.84□□□□□ -0.67
PHGDH-224ENST00000641711 CENPCQ03188 943 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 CUL1Q13616 776 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 ADGRE1Q14246 886 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 COL19A1Q14993 1142 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 DCAF12L1Q5VU92 463 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 FAM171A1Q5VUB5 890 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 KIAA0319Q5VV43 1072 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 LMBRD2Q68DH5 695 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-224ENST00000641711 DSTYKQ6XUX3 929 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 Q7L0L9 218 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 RTL10Q7L3V2 364 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 MREGQ8N565 214 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 TOP6BLQ8N6T0 577 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 UBL4BQ8N7F7 174 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 MRPL43Q8N983 215 aaKnown RBP10.84□□□□□ -0.67
PHGDH-224ENST00000641711 ZNF564Q8TBZ8 553 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-224ENST00000641711 FAM71BQ8TC56 605 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 SEC14L1Q92503 715 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 ZNF653Q96CK0 615 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 VCPIP1Q96JH7 1222 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 ZSWIM1Q9BR11 485 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 NUP85Q9BW27 656 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.84□□□□□ -0.672e-20■■■■■ 347.8
PHGDH-224ENST00000641711 ST7Q9NRC1 585 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 MTRRQ9UBK8 725 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 MAFFQ9ULX9 164 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 AGAP1Q9UPQ3 857 aa10.84□□□□□ -0.67
PHGDH-224ENST00000641711 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-224ENST00000641711 CCDC66A2RUB6 948 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 C2orf71A6NGG8 1288 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 OR6C75A6NL08 312 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 SART1O43290 800 aaKnown RBP10.83□□□□□ -0.68
PHGDH-224ENST00000641711 HUS1O60921 280 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 LILRB3O75022 631 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 OAZ2O95190 189 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 KRT19P08727 400 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 COMTP21964 271 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 DNAJB1P25685 340 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 CTNNA1P35221 906 aaKnown RBP10.83□□□□□ -0.68
PHGDH-224ENST00000641711 TNNT3P45378 269 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-224ENST00000641711 NDUFV1P49821 464 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 PEX5P50542 639 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 GUCY2FP51841 1108 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 RNASE9P60153 205 aaKnown RBP10.83□□□□□ -0.68
PHGDH-224ENST00000641711 YWHAHQ04917 246 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-224ENST00000641711 SMARCB1Q12824 385 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 MRPL58Q14197 206 aaKnown RBP10.83□□□□□ -0.68
PHGDH-224ENST00000641711 PSMD5Q16401 504 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 DUSP6Q16828 381 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 SGSM1Q2NKQ1 1148 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 ZNF699Q32M78 642 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 PLPP4Q5VZY2 271 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 ALS2CLQ60I27 953 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 LIMS2Q7Z4I7 341 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 MAATS1Q7Z4T9 603 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms