RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 SPIRE1Q08AE8 756 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 OTUD3Q5T2D3 398 aaPredicted RBP11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 C6orf183Q5T699 404 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 TMEM26Q6ZUK4 368 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 ARMCX2Q7L311 632 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 KRT35Q92764 455 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 PTPRN2Q92932 1015 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 TATDN2Q93075 761 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 CENPTQ96BT3 561 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 MNTQ99583 582 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 TMEM117Q9H0C3 514 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 NDFIP2Q9NV92 336 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 WHRNQ9P202 907 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 TUBGCP4Q9UGJ1 667 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 CNOT7Q9UIV1 285 aaKnown RBP11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 PSAPP07602 524 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 ZNF806P0C7X5 589 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 MSL3P1P0C860 447 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 GSSP48637 474 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 FOLH1Q04609 750 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 CHRNDQ07001 517 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 SNX17Q15036 470 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 DLGAP5Q15398 846 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 BROXQ5VW32 411 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 SLFN13Q68D06 897 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 PI16Q6UXB8 463 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 SETD9Q8NE22 299 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 GRPEL2Q8TAA5 225 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 SLC7A3Q8WY07 619 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 DHX35Q9H5Z1 703 aaKnown RBP11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 TUFT1Q9NNX1 390 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 GPC6Q9Y625 555 aaPredicted RBP11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 POTEMA6NI47 508 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 SUPT3HB4E1H0 165 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 CYP26A1O43174 497 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 NPTXRO95502 500 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 TMEM253P0C7T8 217 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 SP100P23497 879 aaPredicted RBP11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 HK2P52789 917 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 BLMHQ13867 455 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 ATP13A5Q4VNC0 1218 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 SEL1L3Q68CR1 1132 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 PRMT9Q6P2P2 845 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 EFL1Q7Z2Z2 1120 aaKnown RBP11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 KRT77Q7Z794 578 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 FAR2Q96K12 515 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 WRNIP1Q96S55 665 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 ALDH8A1Q9H2A2 487 aaPredicted RBP11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 GOLPH3Q9H4A6 298 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 TRPV5Q9NQA5 729 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 PLCL2Q9UPR0 1127 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 ARHGEF12Q9NZN5 1544 aa11.29□□□□□ -0.6
KCNMA1-259ENST00000639406 BIRC5O15392 142 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 APOA4P06727 396 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 RRM2P31350 389 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ADD2P35612 726 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 SLC16A1P53985 500 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 CDK16Q00536 496 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 SLFN12LQ6IEE8 588 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 DHDDSQ86SQ9 333 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 CACTIN-AS1Q8N1I8 211 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 OSBP2Q969R2 916 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 LGR6Q9HBX8 967 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 VAV3Q9UKW4 847 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 DOLKQ9UPQ8 538 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ARPC4-TTLL3A0A0A6YYG9 625 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 SRRM3A6NNA2 597 aaPredicted RBP11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 H7C0S8 307 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 M0QYV0 167 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 AXIN1O15169 862 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ENTPD5O75356 428 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ATG7O95352 703 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 P4HBP07237 508 aaKnown RBP11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 TBXAS1P24557 533 aaPredicted RBP11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ADORA1P30542 326 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 SSTR3P32745 418 aaPredicted RBP11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 SLC26A3P40879 764 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 BCAMP50895 628 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ITGA7Q13683 1181 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ZNF667Q5HYK9 610 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ERICH5Q6P6B1 374 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 HTRA1Q92743 480 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 STK33Q9BYT3 514 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 TRIM54Q9BYV2 358 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 OSBPL6Q9BZF3 934 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 C8orf4Q9NR00 106 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 NMRK1Q9NWW6 199 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 POLG2Q9UHN1 485 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 COQ6Q9Y2Z9 468 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 TRPM2O94759 1503 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 INO80B-WBP1J3KQ70 363 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 TOP3AQ13472 1001 aaPredicted RBP11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 SUPT20HL1Q3ZLR7 823 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 KIAA0408Q6ZU52 694 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 METTL23Q86XA0 190 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 SCAIQ8N9R8 606 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ATG16L2Q8NAA4 619 aa11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 TDRD5Q8NAT2 981 aaKnown RBP11.28□□□□□ -0.6
KCNMA1-259ENST00000639406 ZSCAN18Q8TBC5 510 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms