RNA–Protein interactions for RNA: ENST00000618318.1

RPRD1B-208, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-208ENST00000618318 CNKSR3Q6P9H4 555 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 TMCO3Q6UWJ1 677 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 C4orf50Q6ZRC1 276 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 OSTM1Q86WC4 334 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 IFT20Q8IY31 132 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 COLGALT2Q8IYK4 626 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 KATNAL2Q8IYT4 538 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 EXD1Q8NHP7 514 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 MYCBPAPQ8TBZ2 947 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 SLC2A14Q8TDB8 520 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 KCTD13Q8WZ19 329 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 CD101Q93033 1021 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 MS4A14Q96JA4 679 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 BTBD6Q96KE9 485 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 MCEEQ96PE7 176 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 CPXM1Q96SM3 734 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 RHOXF2Q9BQY4 288 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 TRIM62Q9BVG3 475 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 PARD6BQ9BYG5 372 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 OSBPL7Q9BZF2 842 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 GOLPH3Q9H4A6 298 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 SLITRK6Q9H5Y7 841 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 FAM49BQ9NUQ9 324 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 CHORDC1Q9UHD1 332 aaPredicted RBP8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 USTQ9Y2C2 406 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 ATP11BQ9Y2G3 1177 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 FAN1Q9Y2M0 1017 aa8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 V9GYY5 206 aaPredicted RBP8.29□□□□□ -1.08
RPRD1B-208ENST00000618318 A0A0C4DFX4 3053 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 MYH10P35580 1976 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 CCDC151A5D8V7 595 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 E5RJQ4 531 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 H7C4K7 107 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 TJP3O95049 919 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 PDGFRAP16234 1089 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 SDC4P31431 198 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 CHRNA3P32297 505 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 PCK1P35558 622 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 RPL34P49207 117 aaKnown RBP8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 ZNF143P52747 638 aaPredicted RBP8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 CCL23P55773 120 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 RPL7AP62424 266 aaKnown RBP8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 C2orf54Q08AI8 447 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 SMARCB1Q12824 385 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 NFE2Q16621 373 aaPredicted RBP8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 BOLA3Q53S33 107 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 C2CD6Q53TS8 623 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 MDH1BQ5I0G3 518 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 INTS6LQ5JSJ4 861 aaKnown RBP8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 PMF1Q6P1K2 205 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 WDR93Q6P2C0 686 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 POLNQ7Z5Q5 900 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 TTC30AQ86WT1 665 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 SLC13A5Q86YT5 568 aaPredicted RBP8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 CCDC50Q8IVM0 306 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 MAP7D3Q8IWC1 876 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 SIX6OS1Q8N1H7 587 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 TMEM130Q8N3G9 435 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 TMEM199Q8N511 208 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 SMARCD1Q96GM5 515 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 CNPY3Q9BT09 278 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 COL25A1Q9BXS0 654 aaPredicted RBP8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 PPP1R12CQ9BZL4 782 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 DPEP3Q9H4B8 488 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 ARFGAP3Q9NP61 516 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 METTL5Q9NRN9 209 aaKnown RBP8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 TBC1D13Q9NVG8 400 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 RASAL2Q9UJF2 1139 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 TMEM59LQ9UK28 342 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 RAB21Q9UL25 225 aa8.28□□□□□ -1.08
RPRD1B-208ENST00000618318 FAM170AA1A519 330 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 FAM187AA6NFU0 413 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 OR6C75A6NL08 312 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 C2CD4BA6NLJ0 364 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 TBKBP1A7MCY6 615 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 DPYSL4O14531 572 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 FSCN2O14926 492 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 PRPSAP2O60256 369 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 AP1G2O75843 785 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 DDHD2O94830 711 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 OAZ2O95190 189 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 TIMP1P01033 207 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 AMHP03971 560 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 LCP1P13796 627 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 CCDC130P13994 396 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 GBP1P32455 592 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 CYP2C18P33260 490 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 RFC1P35251 1148 aaPredicted RBP8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 BRCC3P46736 316 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 RGS7P49802 495 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 AFF1P51825 1210 aaKnown RBP8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 LMNB2Q03252 620 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 PDAP1Q13442 181 aaKnown RBP8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 DHX34Q14147 1143 aaKnown RBP8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 PTPROQ16827 1216 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 CLLU1OSQ5K130 101 aa8.27□□□□□ -1.09
RPRD1B-208ENST00000618318 FAM171BQ6P995 826 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms