RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 DCAKDQ8WVC6 231 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 SEPT1Q8WYJ6 367 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 ANKRD36BP1Q96IX9 119 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 ACSS3Q9H6R3 686 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 PPCSQ9HAB8 311 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 CYLDQ9NQC7 956 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 HMGXB4Q9UGU5 601 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 ZFP69BQ9UJL9 534 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 A0A0G2JND7 137 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 NFKBIEO00221 500 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 NDC80O14777 642 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 AVILO75366 819 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 CXCL8P10145 99 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 RPS12P25398 132 aaKnown RBP12.35□□□□□ -0.43
C11orf54-215ENST00000617482 RAD23BP54727 409 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 DPYSL3Q14195 570 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 PARP6Q2NL67 630 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 KLHL38Q2WGJ6 581 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 RAB6CQ53S08 254 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 FYB2Q5VWT5 728 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 IER5Q5VY09 327 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 EEF1DP3Q658K8 133 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 POTEAQ6S8J7 498 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 DLK2Q6UY11 383 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 AGGF1Q8N302 714 aaeCLIP12.35□□□□□ -0.43
C11orf54-215ENST00000617482 ZNF276Q8N554 614 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 FAM13CQ8NE31 585 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 MZB1Q8WU39 189 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 PTPRN2Q92932 1015 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 MIEF2Q96C03 454 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 KLRG1Q96E93 195 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 TWNKQ96RR1 684 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 INO80BQ9C086 356 aaPredicted RBP12.35□□□□□ -0.43
C11orf54-215ENST00000617482 RAB6CQ9H0N0 254 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 SDCBP2Q9H190 292 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 LHX5Q9H2C1 402 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 EFR3BQ9Y2G0 817 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 RLFQ13129 1914 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 SOWAHBA6NEL2 793 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 MED7O43513 233 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 CSDE1O75534 798 aaKnown RBP12.34□□□□□ -0.43
C11orf54-215ENST00000617482 MT-ND3P03897 115 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 GM2AP17900 193 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 ELK3P41970 407 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 HSDL1Q3SXM5 330 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
C11orf54-215ENST00000617482 ANKRD20A2Q5SQ80 823 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 TREML2Q5T2D2 321 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 ANKRD20A1Q5TYW2 823 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 ATF7IP2Q5U623 682 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 ANKRD20A3Q5VUR7 823 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 DARS2Q6PI48 645 aaKnown RBP12.34□□□□□ -0.43
C11orf54-215ENST00000617482 MPZL3Q6UWV2 235 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 LRRC6Q86X45 466 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 NCAPG2Q86XI2 1143 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 BANPQ8N9N5 519 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 CHST13Q8NET6 341 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 DHRS4Q9BTZ2 278 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 MANSC1Q9H8J5 431 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 BTBD7Q9P203 1132 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 USP18Q9UMW8 372 aa12.34□□□□□ -0.43
C11orf54-215ENST00000617482 MCF2LO15068 1137 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 RNF8O76064 485 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 MXD4Q14582 209 aaPredicted RBP12.33□□□□□ -0.43
C11orf54-215ENST00000617482 SURF1Q15526 300 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 ZNF667Q5HYK9 610 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 CDCA2Q69YH5 1023 aaPredicted RBP12.33□□□□□ -0.43
C11orf54-215ENST00000617482 UBA3Q8TBC4 463 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 PHIPQ8WWQ0 1821 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 R3HDMLQ9H3Y0 253 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 SMYD3Q9H7B4 428 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 SSU72Q9NP77 194 aaKnown RBP12.33□□□□□ -0.43
C11orf54-215ENST00000617482 SLC5A4Q9NY91 659 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 KANSL3Q9P2N6 904 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 SIX4Q9UIU6 781 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 SUFUQ9UMX1 484 aa12.33□□□□□ -0.43
C11orf54-215ENST00000617482 PARP14Q460N5 1801 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 ZBTB42B2RXF5 422 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 E7ESA3 106 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 APOC4-APOC2K7ER74 178 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 C2CD2LO14523 706 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 LPXNO60711 386 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 TRUB2O95900 331 aaKnown RBP12.33□□□□□ -0.44
C11orf54-215ENST00000617482 APOC2P02655 101 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 NFICP08651 508 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 TROVE2P10155 538 aaKnown RBP eCLIP12.33□□□□□ -0.44
C11orf54-215ENST00000617482 NEFHP12036 1026 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 TAZQ16635 292 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 KBTBD12Q3ZCT8 623 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 SLC45A4Q5BKX6 768 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 C1orf228Q6PIY5 440 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 METTL7BQ6UX53 244 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 TSHZ1Q6ZSZ6 1077 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 CLNKQ7Z7G1 428 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 SLC4A11Q8NBS3 891 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 CMASQ8NFW8 434 aaPredicted RBP12.33□□□□□ -0.44
C11orf54-215ENST00000617482 FNIP1Q8TF40 1166 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 INPP5DQ92835 1189 aa12.33□□□□□ -0.44
C11orf54-215ENST00000617482 SERAC1Q96JX3 654 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms