RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 CYP2C18P33260 490 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 PAQR9Q6ZVX9 377 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 FUKQ8N0W3 1084 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 SLC35F5Q8WV83 523 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 CASKIN2Q8WXE0 1202 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 C10orf88Q9H8K7 445 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 CRTAC1Q9NQ79 661 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 GIT1Q9Y2X7 761 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 SCN5AQ14524 2016 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 GOLGA6BA6NDN3 693 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 MIF4GDA9UHW6 222 aaKnown RBP19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 NT5C1B-RDH14C9J2C7 533 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 PAPSS1O43252 624 aaPredicted RBP19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 UPP2O95045 317 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 OR4Q2P0C623 313 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 CDK7P50613 346 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 FAM26DQ5JW98 314 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 CD300LGQ6UXG3 332 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 CHST7Q9NS84 486 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 CHD7Q9P2D1 2997 aa19.17■□□□□ 0.66
SNAPC3-207ENST00000610884 C9IYK1 514 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 TRIP13Q15645 432 aaPredicted RBP19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 PKDCCQ504Y2 493 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 SEL1L2Q5TEA6 688 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 CCDC70Q6NSX1 233 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 ZNF598Q86UK7 904 aaKnown RBP19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 SLC13A5Q86YT5 568 aaPredicted RBP19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 MED10Q9BTT4 135 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 SAGE1Q9NXZ1 904 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 RNF14Q9UBS8 474 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 HESX1Q9UBX0 185 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 SIGLEC16A6NMB1 481 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 ZNF623O75123 536 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 PTPN1P18031 435 aaKnown RBP19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 MAP3K7CLP57077 242 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 DYNLT1P63172 113 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 ARHGEF6Q15052 776 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 HACE1Q8IYU2 909 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 LRRN4Q8WUT4 740 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 MAGOHBQ96A72 148 aaKnown RBP19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 IP6K2Q9UHH9 426 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 TTC3P53804 2025 aa19.16■□□□□ 0.66
SNAPC3-207ENST00000610884 SYNJ2BP-COX16A0A087WUM0 186 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 LRCH4O75427 683 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 PNPLA4P41247 253 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 MFSD7Q6UXD7 560 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 SND1Q7KZF4 910 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 AENQ8WTP8 325 aaKnown RBP19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 RXFP2Q8WXD0 754 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 NEUROG2Q9H2A3 272 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 RGS18Q9NS28 235 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 COX16Q9P0S2 106 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 GOLGA6CA6NDK9 693 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 DNM1LO00429 736 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 DAPK3O43293 454 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 GOLGA6DP0CG33 693 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 SELPP16109 830 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 OR1G1P47890 313 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 MNX1P50219 401 aaPredicted RBP19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 TRIM60Q495X7 471 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 SCYL2Q6P3W7 929 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 SLC24A5Q71RS6 500 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 FAM76AQ8TAV0 307 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 HSPH1Q92598 858 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 KHSRPQ92945 711 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 SLC38A7Q9NVC3 462 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 TMLHEQ9NVH6 421 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 GPATCH2LQ9NWQ4 482 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 GOLGA6AQ9NYA3 693 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 C5orf42Q9H799 3197 aa19.15■□□□□ 0.66
SNAPC3-207ENST00000610884 PDGFRAP16234 1089 aa19.14■□□□□ 0.66
SNAPC3-207ENST00000610884 CTNNA2P26232 953 aa19.14■□□□□ 0.66
SNAPC3-207ENST00000610884 RNASELQ05823 741 aaKnown RBP19.14■□□□□ 0.66
SNAPC3-207ENST00000610884 SIX1Q15475 284 aaPredicted RBP19.14■□□□□ 0.66
SNAPC3-207ENST00000610884 RHOT1Q8IXI2 618 aa19.14■□□□□ 0.66
SNAPC3-207ENST00000610884 CRYBG2Q8N1P7 616 aa19.14■□□□□ 0.66
SNAPC3-207ENST00000610884 PCED1BQ96HM7 432 aa19.14■□□□□ 0.66
SNAPC3-207ENST00000610884 RTP3Q9BQQ7 232 aa19.14■□□□□ 0.66
SNAPC3-207ENST00000610884 WBP1LQ9NX94 342 aa19.14■□□□□ 0.66
SNAPC3-207ENST00000610884 FRMPD3Q5JV73 1810 aa19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 LRRD1A4D1F6 860 aa19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 CES2O00748 559 aa19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 PITX1P78337 314 aaPredicted RBP19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 TLE2Q04725 743 aa19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 ITIH3Q06033 890 aa19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 IFRD2Q12894 506 aaPredicted RBP19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 GPRIN1Q7Z2K8 1008 aa19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 PIGZQ86VD9 579 aa19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 LRRTM3Q86VH5 581 aa19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 PEBP4Q96S96 227 aa19.14■□□□□ 0.65
SNAPC3-207ENST00000610884 ENPP3O14638 875 aa19.13■□□□□ 0.65
SNAPC3-207ENST00000610884 KRT1P04264 644 aa19.13■□□□□ 0.65
SNAPC3-207ENST00000610884 VPS41P49754 854 aa19.13■□□□□ 0.65
SNAPC3-207ENST00000610884 FAM117BQ6P1L5 589 aa19.13■□□□□ 0.65
SNAPC3-207ENST00000610884 UNC93AQ86WB7 457 aa19.13■□□□□ 0.65
SNAPC3-207ENST00000610884 MCRS1Q96EZ8 462 aa19.13■□□□□ 0.65
SNAPC3-207ENST00000610884 TMPRSS4Q9NRS4 437 aa19.13■□□□□ 0.65
SNAPC3-207ENST00000610884 STRIP2Q9ULQ0 834 aa19.13■□□□□ 0.65
SNAPC3-207ENST00000610884 ATP11BQ9Y2G3 1177 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms