RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	FAM83B	Q5T0W9	1011 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ATL3	Q6DD88	541 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PRPF39	Q86UA1	669 aa	Known RBP	4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SHCBP1	Q8NEM2	672 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CNOT6L	Q96LI5	555 aa	Known RBP	4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	DCUN1D5	Q9BTE7	237 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZSCAN5A	Q9BUG6	496 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	RIBC2	Q9H4K1	309 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PCIF1	Q9H4Z3	704 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	HAUS4	Q9H6D7	363 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MARCH7	Q9H992	704 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	FANCL	Q9NW38	375 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	KLHL3	Q9UH77	587 aa		4.23	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PDS5A	Q29RF7	1337 aa	Known RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	EFCAB10	A6NFE3	127 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624		B2RBV5	119 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624		C9IYK1	514 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TFEC	O14948	347 aa	Predicted RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CPA1	P15085	419 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	JAK1	P23458	1154 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	GADD45A	P24522	165 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	HNRNPH2	P55795	449 aa	Known RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PER3	P56645	1201 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	GJA9	P57773	515 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	POLA2	Q14181	598 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ACAP2	Q15057	778 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	NOL9	Q5SY16	702 aa	Known RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	STK32C	Q86UX6	486 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ATG16L2	Q8NAA4	619 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	OXCT2	Q9BYC2	517 aa	Predicted RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	NYX	Q9GZU5	481 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	BHMT2	Q9H2M3	363 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TRIM10	Q9UDY6	481 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PALD1	Q9ULE6	856 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SULT1B1	O43704	296 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SCNN1B	P51168	640 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	RPP38	P78345	283 aa	Known RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CACNB2	Q08289	660 aa	Predicted RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	DGLUCY	Q7Z3D6	616 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	KBTBD7	Q8WVZ9	684 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TNKS2	Q9H2K2	1166 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MAP3K20	Q9NYL2	800 aa	Known RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZNF224	Q9NZL3	707 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TJP2	Q9UDY2	1190 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	HERC5	Q9UII4	1024 aa	Known RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PTGES3L	E9PB15	166 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624		G3V2T6	193 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	VWA5A	O00534	786 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ATP9A	O75110	1047 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MOCS2	O96007	188 aa	Predicted RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MECP2	P51608	486 aa	Known RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CNTN1	Q12860	1018 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PKN1	Q16512	942 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PPP1R2P3	Q6NXS1	205 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	POTEA	Q6S8J7	498 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SPATA21	Q7Z572	469 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CAMK1D	Q8IU85	385 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	GPRASP2	Q96D09	838 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SHCBP1L	Q9BZQ2	653 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TUBB1	Q9H4B7	451 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	EXO5	Q9H790	373 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	MIEF1	Q9NQG6	463 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	STARD7	Q9NQZ5	370 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ERVK-10	P10266	1014 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	KBTBD12	Q3ZCT8	623 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	WLS	Q5T9L3	541 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TPTE2	Q6XPS3	522 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PODN	Q7Z5L7	613 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PTPRN2	Q92932	1015 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	EXOC4	Q96A65	974 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	NUDT12	Q9BQG2	462 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CCSER2	Q9H7U1	834 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PRKAG3	Q9UGI9	489 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	NRBP1	Q9UHY1	535 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	WRB	O00258	174 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PODXL	O00592	558 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CLIC2	O15247	247 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	EIF3D	O15371	548 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PSMB9	P28065	219 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	TRIM28	Q13263	835 aa	Known RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	BIK	Q13323	160 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	AKAP4	Q5JQC9	854 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	IRGC	Q6NXR0	463 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	EEPD1	Q7L9B9	569 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	KRT28	Q7Z3Y7	464 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ARHGAP22	Q7Z5H3	698 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SLFN12	Q8IYM2	578 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	BHMT	Q93088	406 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	CMTM5	Q96DZ9	223 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	XKR8	Q9H6D3	395 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PFDN2	Q9UHV9	154 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	SPACA6	W5XKT8	324 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	C5orf51	A6NDU8	294 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	PHF20L1	A8MW92	1017 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	GRM8	O00222	908 aa		4.22	□□□□□ -1.73
KCNMA1-223	ENST00000604624	NOS2	P35228	1153 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms