RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PPP1R26Q5T8A7 1209 aaPredicted RBP20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 DENND5BQ6ZUT9 1274 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 RBBP8NLQ8NC74 664 aaPredicted RBP20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 SHKBP1Q8TBC3 707 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 MCRS1Q96EZ8 462 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 LSM14BQ9BX40 385 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 SIX2Q9NPC8 291 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 TMEM30AQ9NV96 361 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 EHD2Q9NZN4 543 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 LGALS16A8MUM7 142 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 GOLGA6L19H0YKK7 550 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 MICAL2O94851 1124 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 PAEPP09466 180 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 VDRP11473 427 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 MAP3K7CLP57077 242 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 KCNMA1Q12791 1236 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 IFRD2Q12894 506 aaPredicted RBP20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 TEAD2Q15562 447 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 ARHGAP15Q53QZ3 475 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 GAREM2Q75VX8 874 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 LUZP1Q86V48 1076 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 RNF135Q8IUD6 432 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 TRMT2BQ96GJ1 504 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 KCNK16Q96T55 309 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 SMOQ99835 787 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 SLITRK6Q9H5Y7 841 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 EPS15L1Q9UBC2 864 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 LIMD1Q9UGP4 676 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 DNAJC12Q9UKB3 198 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 KIAA1257Q9ULG3 409 aa20.83■□□□□ 0.93
SHKBP1-214ENST00000597396 MOSPD3O75425 235 aa20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 USP8P40818 1118 aa20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 UBXN1Q04323 297 aa20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 ARHGAP17Q68EM7 881 aa20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 LRSAM1Q6UWE0 723 aa20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 NUP93Q8N1F7 819 aa20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 MYRFLQ96LU7 910 aa20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 PCMTD1Q96MG8 357 aaPredicted RBP20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 TSPY26PQ9H489 355 aa20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 IL21Q9HBE4 155 aa20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 GDE1Q9NZC3 331 aa20.82■□□□□ 0.92
SHKBP1-214ENST00000597396 LRRC10BA6NIK2 292 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 RNF225M0QZC1 329 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 NRG2O14511 850 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 RTN3O95197 1032 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 NPR3P17342 541 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 CYP4F8P98187 520 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 GOLGA7BQ2TAP0 167 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 FILIP1LQ4L180 1135 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 GPR158Q5T848 1215 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 CLEC20AQ6ZU45 233 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 ZMIZ2Q8NF64 920 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 DUSP16Q9BY84 665 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 GPR88Q9GZN0 384 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 CSNK1G1Q9HCP0 422 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 HESX1Q9UBX0 185 aa20.81■□□□□ 0.92
SHKBP1-214ENST00000597396 PRR33A8MZF0 331 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 DCXO43602 365 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 BEST1O76090 585 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 F11P03951 625 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 ASGR2P07307 311 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 RFX1P22670 979 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 ZNF132P52740 706 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 SLC8A3P57103 927 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 USP46P62068 366 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 RAPGEF1Q13905 1077 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 KLHDC7AQ5VTJ3 777 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 MTSS1LQ765P7 747 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 APTXQ7Z2E3 356 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 MRPS31Q92665 395 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 AJAP1Q9UKB5 411 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 TSPAN16Q9UKR8 245 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 CNTN6Q9UQ52 1028 aa20.8■□□□□ 0.92
SHKBP1-214ENST00000597396 HELZP42694 1942 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 BRD2P25440 801 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 YWHAQP27348 245 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 SLC5A3P53794 718 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 BCAT1P54687 386 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 SYCP1Q15431 976 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 STILQ15468 1287 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 STXBP5Q5T5C0 1151 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 ANKRD52Q8NB46 1076 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 SHC3Q92529 594 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 SLITRK1Q96PX8 696 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 TTLL2Q9BWV7 592 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 PLCB1Q9NQ66 1216 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 IGSF9Q9P2J2 1179 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 ARIH1Q9Y4X5 557 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 FHOD1Q9Y613 1164 aa20.79■□□□□ 0.92
SHKBP1-214ENST00000597396 O00370 1275 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 SERPINC1P01008 464 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 CALCAP01258 141 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 UCHL3P15374 230 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 KLK7P49862 253 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 DPY19L2P1Q6NXN4 242 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 TMEM150AQ86TG1 271 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 ST13P5Q8NFI4 369 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 TFAP2BQ92481 460 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 FBXO32Q969P5 355 aa20.78■□□□□ 0.92
SHKBP1-214ENST00000597396 NXPE3Q969Y0 559 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms