RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 AGPAT3Q9NRZ7 376 aa6.57□□□□□ -1.36
SMAD4-212ENST00000591126 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.57□□□□□ -1.366e-6■□□□□ 8.3
SMAD4-212ENST00000591126 KPNA5O15131 536 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 GRM6O15303 877 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 GCATO75600 419 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 PCDH8O95206 1070 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 SCNN1GP51170 649 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 CAP1Q01518 475 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 CYP24A1Q07973 514 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 DRAP1Q14919 205 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ZNF394Q53GI3 561 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 PRPF38BQ5VTL8 546 aaKnown RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ABHD15Q6UXT9 468 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ZNF720Q7Z2F6 126 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ARHGAP24Q8N264 748 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 CELF5Q8N6W0 485 aaKnown RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 IRX2Q9BZI1 471 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ANAPC7Q9UJX3 599 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 BAG5Q9UL15 447 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 PAPPAQ13219 1627 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 PGRMC1O00264 195 aaKnown RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 PSMD10O75832 226 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 SYPP08247 313 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 SERPINA4P29622 427 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ARL4CP56559 192 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 DAB2P98082 770 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 CDO1Q16878 200 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 SLC39A12Q504Y0 691 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 LLGL2Q6P1M3 1020 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 FOXR2Q6PJQ5 311 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 TAS2R42Q7RTR8 314 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 MON1AQ86VX9 555 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 TSTD1Q8NFU3 115 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 OXER1Q8TDS5 423 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 VCPIP1Q96JH7 1222 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 AGPAT1Q99943 283 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 RTP3Q9BQQ7 232 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 MTMR12Q9C0I1 747 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 RETREG1Q9H6L5 497 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 WDR6Q9NNW5 1121 aaKnown RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 DNAJC17Q9NVM6 304 aaKnown RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 DRG1Q9Y295 367 aaKnown RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 C5P01031 1676 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ASTN2O75129 1339 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 DFFAO00273 331 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 FDFT1P37268 417 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ROR1Q01973 937 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ITGA9Q13797 1035 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 LYPLAL1Q5VWZ2 237 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 DENND2CQ68D51 928 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 RAPH1Q70E73 1250 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 METTL16Q86W50 562 aaKnown RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 PALB2Q86YC2 1186 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 DBF4BQ8NFT6 615 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 EXD1Q8NHP7 514 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 CASKIN2Q8WXE0 1202 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 HLA-CQ95604 372 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ZNF668Q96K58 619 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 MTMR9Q96QG7 549 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 VAT1Q99536 393 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 KDM4CQ9H3R0 1056 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 HACD3Q9P035 362 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 IGSF9Q9P2J2 1179 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 THEGQ9P2T0 379 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 SAR1BQ9Y6B6 198 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 KCNK3O14649 394 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 OXTRP30559 389 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ZNF75DP51815 510 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 PSMC6P62333 389 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 CBX1P83916 185 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 MDH1BQ5I0G3 518 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 MAP3K21Q5TCX8 1036 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 KIAA1324Q6UXG2 1013 aaKnown RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 SERPINA13PQ6UXR4 307 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 GET4Q7L5D6 327 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ADGRA1Q86SQ6 560 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 ZNF248Q8NDW4 579 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 OVCA2Q8WZ82 227 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 HDAC11Q96DB2 347 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 PDGFDQ9GZP0 370 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 DNAI1Q9UI46 699 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 FBXO2Q9UK22 296 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 FBXO10Q9UK96 956 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 HBS1LQ9Y450 684 aaKnown RBP6.56□□□□□ -1.36
SMAD4-212ENST00000591126 RAD54BQ9Y620 910 aa6.56□□□□□ -1.36
SMAD4-212ENST00000591126 H3BMM5 538 aa6.55□□□□□ -1.36
SMAD4-212ENST00000591126 PRNPP04156 253 aa6.55□□□□□ -1.36
SMAD4-212ENST00000591126 ERVK-10P10266 1014 aa6.55□□□□□ -1.36
SMAD4-212ENST00000591126 KRT15P19012 456 aa6.55□□□□□ -1.36
SMAD4-212ENST00000591126 KCNA3P22001 575 aa6.55□□□□□ -1.36
SMAD4-212ENST00000591126 MLH1P40692 756 aa6.55□□□□□ -1.36
SMAD4-212ENST00000591126 YWHAGP61981 247 aaKnown RBP eCLIP6.55□□□□□ -1.36
SMAD4-212ENST00000591126 PURAQ00577 322 aaKnown RBP6.55□□□□□ -1.36
SMAD4-212ENST00000591126 EFEMP1Q12805 493 aa6.55□□□□□ -1.36
SMAD4-212ENST00000591126 ZNF268Q14587 947 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-212ENST00000591126 TCEA2Q15560 299 aa6.55□□□□□ -1.36
SMAD4-212ENST00000591126 RARS2Q5T160 578 aaKnown RBP6.55□□□□□ -1.36
SMAD4-212ENST00000591126 GPR158Q5T848 1215 aa6.55□□□□□ -1.36
SMAD4-212ENST00000591126 FBXL19Q6PCT2 694 aa6.55□□□□□ -1.36
SMAD4-212ENST00000591126 KCNT2Q6UVM3 1135 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms