RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 SMARCE1Q969G3 411 aa24.82■■□□□ 1.56
LSM7-204ENST00000587502 TSG101Q99816 390 aa24.82■■□□□ 1.56
LSM7-204ENST00000587502 B3GNT5Q9BYG0 378 aa24.82■■□□□ 1.56
LSM7-204ENST00000587502 DNAI2Q9GZS0 605 aa24.82■■□□□ 1.56
LSM7-204ENST00000587502 CHRDQ9H2X0 955 aa24.82■■□□□ 1.56
LSM7-204ENST00000587502 LMAN1LQ9HAT1 526 aa24.82■■□□□ 1.56
LSM7-204ENST00000587502 GKN1Q9NS71 199 aa24.82■■□□□ 1.56
LSM7-204ENST00000587502 GTSE1Q9NYZ3 720 aa24.82■■□□□ 1.56
LSM7-204ENST00000587502 CCL26Q9Y258 94 aa24.82■■□□□ 1.56
LSM7-204ENST00000587502 PTPRDP23468 1912 aa24.82■■□□□ 1.56
LSM7-204ENST00000587502 PRR23AA6NEV1 266 aa24.81■■□□□ 1.56
LSM7-204ENST00000587502 STX10O60499 249 aa24.81■■□□□ 1.56
LSM7-204ENST00000587502 CKMP06732 381 aa24.81■■□□□ 1.56
LSM7-204ENST00000587502 EPB41P11171 864 aaKnown RBP24.81■■□□□ 1.56
LSM7-204ENST00000587502 CTHP32929 405 aa24.81■■□□□ 1.56
LSM7-204ENST00000587502 MCCD1P59942 119 aaPredicted RBP24.81■■□□□ 1.56
LSM7-204ENST00000587502 AMPD2Q01433 879 aa24.81■■□□□ 1.56
LSM7-204ENST00000587502 PPP2R5DQ14738 602 aa24.81■■□□□ 1.56
LSM7-204ENST00000587502 MAML2Q8IZL2 1156 aaPredicted RBP24.81■■□□□ 1.56
LSM7-204ENST00000587502 SPATA20Q8TB22 786 aa24.81■■□□□ 1.56
LSM7-204ENST00000587502 FAM83CQ9BQN1 747 aa24.81■■□□□ 1.56
LSM7-204ENST00000587502 ZNF518BQ9C0D4 1074 aa24.81■■□□□ 1.56
LSM7-204ENST00000587502 OBSL1O75147 1896 aa24.81■■□□□ 1.56
LSM7-204ENST00000587502 RTN3O95197 1032 aaPredicted RBP24.8■■□□□ 1.56
LSM7-204ENST00000587502 HDCP19113 662 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 PRCPP42785 496 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 RAP1GAPP47736 663 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 GCLMP48507 274 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 PDGFRLQ15198 375 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 DGKKQ5KSL6 1271 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 SMYD4Q8IYR2 804 aaPredicted RBP24.8■■□□□ 1.56
LSM7-204ENST00000587502 SLITRK1Q96PX8 696 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 MED10Q9BTT4 135 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 CYP3A43Q9HB55 503 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 TMEM8AQ9HCN3 771 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 PCDHA5Q9Y5H7 936 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 GREB1Q4ZG55 1949 aa24.8■■□□□ 1.56
LSM7-204ENST00000587502 DMDP11532 3685 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 TRIM49P0CI25 452 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 TRIM49CP0CI26 452 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 CHRNB1P11230 501 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 TCF3P15923 654 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 CSTF1Q05048 431 aaKnown RBP24.79■■□□□ 1.56
LSM7-204ENST00000587502 MTAPQ13126 283 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 RUNX3Q13761 415 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 KRT39Q6A163 491 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 ASCL5Q7RTU5 278 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 NUP93Q8N1F7 819 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 CRYBG2Q8N1P7 616 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 EXOC4Q96A65 974 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 SMARCD1Q96GM5 515 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 FAXDC2Q96IV6 333 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 SDCBP2Q9H190 292 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 GCNT4Q9P109 453 aa24.79■■□□□ 1.56
LSM7-204ENST00000587502 CLDN5O00501 218 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 PPP1R2P41236 205 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 ASPAP45381 313 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 SOX9P48436 509 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 NDST1P52848 882 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 USP46P62068 366 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 UBE2HP62256 183 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 FKBP3Q00688 224 aaKnown RBP24.78■■□□□ 1.56
LSM7-204ENST00000587502 TNK2Q07912 1038 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 PPP3CAQ08209 521 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 STIM1Q13586 685 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 MTF1Q14872 753 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 ACOT1Q86TX2 421 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 SYNPOQ8N3V7 929 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 ARL14EPQ8N8R7 260 aaPredicted RBP24.78■■□□□ 1.56
LSM7-204ENST00000587502 PDZD8Q8NEN9 1154 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 TTC8Q8TAM2 541 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 OVCA2Q8WZ82 227 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 CYP2S1Q96SQ9 504 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 FAM126AQ9BYI3 521 aaPredicted RBP24.78■■□□□ 1.56
LSM7-204ENST00000587502 DMAP1Q9NPF5 467 aaPredicted RBP24.78■■□□□ 1.56
LSM7-204ENST00000587502 PRMT8Q9NR22 394 aaPredicted RBP24.78■■□□□ 1.56
LSM7-204ENST00000587502 COMMD8Q9NX08 183 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 ARHGAP26Q9UNA1 814 aa24.78■■□□□ 1.56
LSM7-204ENST00000587502 RIF1Q5UIP0 2472 aaKnown RBP24.78■■□□□ 1.56
LSM7-204ENST00000587502 PATJQ8NI35 1801 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 C2orf78A6NCI8 922 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 ZNF840PA6NDX5 716 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 SLC16A3O15427 465 aaKnown RBP24.77■■□□□ 1.56
LSM7-204ENST00000587502 KINO60870 393 aaKnown RBP24.77■■□□□ 1.56
LSM7-204ENST00000587502 YWHAQP27348 245 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 CCR3P51677 355 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 LRRC63Q05C16 580 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 ZNF77Q15935 545 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 SPOPLQ6IQ16 392 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 FAM35AQ86V20 835 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 KIAA1958Q8N8K9 716 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 TAS1R2Q8TE23 839 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 OSCP1Q8WVF1 389 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 PCDHGA2Q9Y5H1 932 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 R4GN57 208 aa24.77■■□□□ 1.56
LSM7-204ENST00000587502 PTPRZ1P23471 2315 aaPredicted RBP24.77■■□□□ 1.56
LSM7-204ENST00000587502 LMNAP02545 664 aaKnown RBP24.76■■□□□ 1.55
LSM7-204ENST00000587502 CACNA2D1P54289 1103 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 NRLP54845 237 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 INCA1Q0VD86 236 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms