RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 USP13Q92995 863 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-219ENST00000580540 KCNK16Q96T55 309 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 NELL2Q99435 816 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 PHOX2BQ99453 314 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 BCO2Q9BYV7 579 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 NIF3L1Q9GZT8 377 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 CYP3A43Q9HB55 503 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 TRPV5Q9NQA5 729 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 FAM49BQ9NUQ9 324 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 TDP1Q9NUW8 608 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 TMEM30AQ9NV96 361 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 EHD2Q9NZN4 543 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 ZNF638Q14966 1978 aaKnown RBP17.67■□□□□ 0.42
SREBF1-219ENST00000580540 C2orf78A6NCI8 922 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 PPP1R3GB7ZBB8 358 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 NCAM2O15394 837 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 AP1G2O75843 785 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 USP17L7P0C7H9 530 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 GLULP15104 373 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 BMP6P22004 513 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 ADORA2BP29275 332 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 SOX9P48436 509 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 STX17P56962 302 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 TAF10Q12962 218 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 ANGPT1Q15389 498 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 WDR44Q5JSH3 913 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 CC2D1AQ6P1N0 951 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-219ENST00000580540 PAQR9Q6ZVX9 377 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 ALYREFQ86V81 257 aaKnown RBP17.66■□□□□ 0.42
SREBF1-219ENST00000580540 ZC3H3Q8IXZ2 948 aaKnown RBP17.66■□□□□ 0.42
SREBF1-219ENST00000580540 FUKQ8N0W3 1084 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 NUP93Q8N1F7 819 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 ARL14EPQ8N8R7 260 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-219ENST00000580540 C12orf29Q8N999 325 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 FBXL13Q8NEE6 735 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 SLC2A14Q8TDB8 520 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 FAM3CQ92520 227 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 SMARCD1Q96GM5 515 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 CEP295NLQ96MC4 621 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 SLC22A12Q96S37 553 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 GKN1Q9NS71 199 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 KRT82Q9NSB4 513 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 RAB20Q9NX57 234 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 GTSE1Q9NYZ3 720 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 NUP210Q8TEM1 1887 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-219ENST00000580540 TICRRQ7Z2Z1 1910 aa17.66■□□□□ 0.42
SREBF1-219ENST00000580540 PTPRDP23468 1912 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 DENND4CQ5VZ89 1909 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 SOBPA7XYQ1 873 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 ARNTLO00327 626 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 HDCP19113 662 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 TNK2Q07912 1038 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 CBWD6Q4V339 395 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 ZNF394Q53GI3 561 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 CBWD3Q5JTY5 395 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 CBWD5Q5RIA9 395 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 CRYBG2Q8N1P7 616 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 TATDN2Q93075 761 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 SLITRK1Q96PX8 696 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 TWNKQ96RR1 684 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 NT5C1AQ9BXI3 368 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 DNAI2Q9GZS0 605 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 KIF9Q9HAQ2 790 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 DMAP1Q9NPF5 467 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-219ENST00000580540 SPATA6Q9NWH7 488 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-219ENST00000580540 DLGAP2Q9P1A6 1054 aa17.65■□□□□ 0.42
SREBF1-219ENST00000580540 BICDL2A1A5D9 508 aa17.64■□□□□ 0.41
SREBF1-219ENST00000580540 YWHAQP27348 245 aa17.64■□□□□ 0.41
SREBF1-219ENST00000580540 FILIP1Q7Z7B0 1213 aa17.64■□□□□ 0.41
SREBF1-219ENST00000580540 FBXO32Q969P5 355 aa17.64■□□□□ 0.41
SREBF1-219ENST00000580540 JAKMIP2Q96AA8 810 aa17.64■□□□□ 0.41
SREBF1-219ENST00000580540 CEP63Q96MT8 703 aa17.64■□□□□ 0.41
SREBF1-219ENST00000580540 DUSP9Q99956 384 aaKnown RBP17.64■□□□□ 0.41
SREBF1-219ENST00000580540 TTLL2Q9BWV7 592 aa17.64■□□□□ 0.41
SREBF1-219ENST00000580540 OSBPL6Q9BZF3 934 aa17.64■□□□□ 0.41
SREBF1-219ENST00000580540 C8orf33Q9H7E9 229 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-219ENST00000580540 METTL14Q9HCE5 456 aaKnown RBP17.64■□□□□ 0.41
SREBF1-219ENST00000580540 F5P12259 2224 aa17.64■□□□□ 0.41
SREBF1-219ENST00000580540 OBSL1O75147 1896 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 GREB1Q4ZG55 1949 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 MIA3Q5JRA6 1907 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 ZNF840PA6NDX5 716 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 SHISA7A6NL88 538 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 RTN3O95197 1032 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-219ENST00000580540 MRE11P49959 708 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 PDE6CP51160 858 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 MAP3K7CLP57077 242 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 MCCD1P59942 119 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-219ENST00000580540 INCA1Q0VD86 236 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 LRMPQ12912 555 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 PAK1Q13153 545 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 ZNF268Q14587 947 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-219ENST00000580540 TRIM68Q6AZZ1 485 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 TTI2Q6NXR4 508 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 FRMD5Q7Z6J6 570 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 C1orf210Q8IVY1 113 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 SCAMP5Q8TAC9 235 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 CYFIP2Q96F07 1278 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 HEXIM2Q96MH2 286 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms