RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 UHRF1Q96T88 793 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 RHOBTB2Q9BYZ6 727 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 GTPBP4Q9BZE4 634 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 DPEP3Q9H4B8 488 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 CD320Q9NPF0 282 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 NDFIP2Q9NV92 336 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 HMGXB4Q9UGU5 601 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 SSX2IPQ9Y2D8 614 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 H3BM21 787 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 NCK2O43639 380 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 BNIP3LO60238 219 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 PHACTR2O75167 634 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 PAPLNO95428 1278 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 ASS1P00966 412 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 FAM157BP0CG42 384 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 EPB41P11171 864 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 KRT13P13646 458 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 ASPAP45381 313 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 MARSP56192 900 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 PSMC1P62191 440 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 NTHL1P78549 312 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 ORC1Q13415 861 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 SMAD4Q13485 552 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 WDR72Q3MJ13 1102 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 PPFIBP1Q86W92 1011 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 TRIM59Q8IWR1 403 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 ADGRF2Q8IZF7 708 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 ATAD1Q8NBU5 361 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 STKLD1Q8NE28 680 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 SLC7A14Q8TBB6 771 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 CNOT6LQ96LI5 555 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 FUCA2Q9BTY2 467 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 ZCWPW1Q9H0M4 648 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 POMKQ9H5K3 350 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 TMEM8AQ9HCN3 771 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 CRTAC1Q9NQ79 661 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 HCFC1R1Q9NWW0 138 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 DDX43Q9NXZ2 648 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 ARMCX3Q9UH62 379 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 CUL9Q8IWT3 2517 aa10.13□□□□□ -0.79
NPLOC4-219ENST00000576713 C2orf16Q68DN1 1984 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 CCDC195A0A1B0GUA6 201 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 BICDL2A1A5D9 508 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 MYBPHLA2RUH7 354 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 MTMR11A4FU01 709 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 H7C4K7 107 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 CCL16O15467 120 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 EFSO43281 561 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 HUS1O60921 280 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 N4BP1O75113 896 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 C8AP07357 584 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 CPB1P15086 417 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 ATF2P15336 505 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 WARSP23381 471 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 SP100P23497 879 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 PPP1R2P41236 205 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 PIK3CAP42336 1068 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 MXI1P50539 228 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 ARSDP51689 593 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 AP3M2P53677 418 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 APBA1Q02410 837 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 CREMQ03060 361 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 TNP2Q05952 138 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 ENPEPQ07075 957 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 ADCY1Q08828 1119 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 GPR17Q13304 367 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 TRPC3Q13507 836 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 BMS1Q14692 1282 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 SMAD2Q15796 467 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 KLHL40Q2TBA0 621 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 ZNF699Q32M78 642 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 CCDC40Q4G0X9 1142 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 SLC39A12Q504Y0 691 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 TCERG1LQ5VWI1 586 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 PDXDC1Q6P996 788 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 FRMD5Q7Z6J6 570 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 GPR149Q86SP6 731 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 USP37Q86T82 979 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 TOP6BLQ8N6T0 577 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 ZNF461Q8TAF7 563 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 LMO3Q8TAP4 145 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 TWNKQ96RR1 684 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 MMS19Q96T76 1030 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 DNAJC25Q9H1X3 360 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 HSD3B7Q9H2F3 369 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 ADAM7Q9H2U9 754 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 SFXN1Q9H9B4 322 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 SAMSN1Q9NSI8 373 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 TMEM30AQ9NV96 361 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 DZANK1Q9NVP4 752 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 GTF3C4Q9UKN8 822 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 HCN2Q9UL51 889 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 COQ4Q9Y3A0 265 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 DENND4AQ7Z401 1863 aa10.12□□□□□ -0.79
NPLOC4-219ENST00000576713 DCDC2BA2VCK2 349 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 OR6C75A6NL08 312 aa10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 TERTO14746 1132 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 KHNYNO15037 678 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-219ENST00000576713 FZD6O60353 706 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms