RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 MDH1BQ5I0G3 518 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 CPNE8Q86YQ8 564 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 FUKQ8N0W3 1084 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 JOSD2Q8TAC2 188 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 MYCBPAPQ8TBZ2 947 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 KCTD13Q8WZ19 329 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 MRPL9Q9BYD2 267 aaKnown RBP14.49□□□□□ -0.09
TPM1-215ENST00000558868 UBXN6Q9BZV1 441 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 TJP2Q9UDY2 1190 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 FAM187AA6NFU0 413 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 F8VP50 259 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 HCRTO43612 131 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 PDGFRAP16234 1089 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 ACAT1P24752 427 aaKnown RBP14.48□□□□□ -0.09
TPM1-215ENST00000558868 PTPN7P35236 360 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 PCK1P35558 622 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 TSPY1Q01534 308 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 TLE2Q04725 743 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 FAAP100Q0VG06 881 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 SMC1AQ14683 1233 aaKnown RBP14.48□□□□□ -0.09
TPM1-215ENST00000558868 GPNMBQ14956 572 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 TRIM60Q495X7 471 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 EFHC1Q5JVL4 640 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 ZFYVE27Q5T4F4 411 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 OVOS1Q6IE37 1185 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 OLFML1Q6UWY5 402 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 CCNI2Q6ZMN8 369 aaPredicted RBP14.48□□□□□ -0.09
TPM1-215ENST00000558868 SLC26A9Q7LBE3 791 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 NPAS4Q8IUM7 802 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 CCDC50Q8IVM0 306 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 COLGALT2Q8IYK4 626 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 EIF1ADQ8N9N8 165 aaKnown RBP14.48□□□□□ -0.09
TPM1-215ENST00000558868 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.48□□□□□ -0.09
TPM1-215ENST00000558868 LPIN3Q9BQK8 851 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 PAAF1Q9BRP4 392 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 TBC1D13Q9NVG8 400 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 CACNG4Q9UBN1 327 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 RASAL2Q9UJF2 1139 aa14.48□□□□□ -0.09
TPM1-215ENST00000558868 C2CD4BA6NLJ0 364 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 PAPSS1O43252 624 aaPredicted RBP14.47□□□□□ -0.09
TPM1-215ENST00000558868 ATP2C2O75185 946 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 FBXO21O94952 628 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 HEXIM1O94992 359 aaKnown RBP14.47□□□□□ -0.09
TPM1-215ENST00000558868 KRT1P04264 644 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 SDC4P31431 198 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 BRCC3P46736 316 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 OR1G1P47890 313 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 GJA8P48165 433 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 FNTAP49354 379 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 MNX1P50219 401 aaPredicted RBP14.47□□□□□ -0.09
TPM1-215ENST00000558868 CYP1B1Q16678 543 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 INTS6LQ5JSJ4 861 aaKnown RBP14.47□□□□□ -0.09
TPM1-215ENST00000558868 CD300LGQ6UXG3 332 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 FAM35AQ86V20 835 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 C12orf50Q8NA57 414 aaPredicted RBP14.47□□□□□ -0.09
TPM1-215ENST00000558868 RXFP2Q8WXD0 754 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 MAGOHBQ96A72 148 aaKnown RBP14.47□□□□□ -0.09
TPM1-215ENST00000558868 SMARCD1Q96GM5 515 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 TMEM175Q9BSA9 504 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 COLEC11Q9BWP8 271 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 B3GNT5Q9BYG0 378 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 DDX47Q9H0S4 455 aaKnown RBP14.47□□□□□ -0.09
TPM1-215ENST00000558868 RAB17Q9H0T7 212 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 LRRC4Q9HBW1 653 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 CRTAC1Q9NQ79 661 aa14.47□□□□□ -0.09
TPM1-215ENST00000558868 FEZ2Q9UHY8 353 aaPredicted RBP14.47□□□□□ -0.09
TPM1-215ENST00000558868 DMGDHQ9UI17 866 aaKnown RBP14.47□□□□□ -0.09
TPM1-215ENST00000558868 TIMM13Q9Y5L4 95 aaPredicted RBP14.47□□□□□ -0.09
TPM1-215ENST00000558868 TANC1Q9C0D5 1861 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 TULP2O00295 520 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 SYN3O14994 580 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 RAD51CO43502 376 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 LRCH4O75427 683 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 TADA2AO75478 443 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 AP1G2O75843 785 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 DDHD2O94830 711 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 GLI1P08151 1106 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 LCP1P13796 627 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 TKTP29401 623 aaKnown RBP14.46□□□□□ -0.09
TPM1-215ENST00000558868 GJC1P36383 396 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 PTPN9P43378 593 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 SLC7A5Q01650 507 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 YWHAHQ04917 246 aaPredicted RBP14.46□□□□□ -0.09
TPM1-215ENST00000558868 CUL1Q13616 776 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 AADACL2Q6P093 401 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 FAM171BQ6P995 826 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 PIGZQ86VD9 579 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 ZNF280BQ86YH2 543 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 SCUBE3Q8IX30 993 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 SIX6OS1Q8N1H7 587 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 EMC1Q8N766 993 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 OSBPL8Q9BZF1 889 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 C11orf49Q9H6J7 331 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 GDF3Q9NR23 364 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 KRT82Q9NSB4 513 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 TMEM39AQ9NV64 488 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 PCYOX1Q9UHG3 505 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 TBX21Q9UL17 535 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 EFR3BQ9Y2G0 817 aa14.46□□□□□ -0.09
TPM1-215ENST00000558868 ATP11BQ9Y2G3 1177 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms