RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 GLE1Q53GS7 698 aaKnown RBP11.46□□□□□ -0.57
PABPN1-203ENST00000553960 ZNF280DQ6N043 979 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 FUT10Q6P4F1 479 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 C16orf59Q7L2K0 433 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 FAM35AQ86V20 835 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 MMGT1Q8N4V1 131 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 EIF1ADQ8N9N8 165 aaKnown RBP11.46□□□□□ -0.57
PABPN1-203ENST00000553960 EXD1Q8NHP7 514 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 SLC2A14Q8TDB8 520 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 RABGGTAQ92696 567 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 IGSF21Q96ID5 467 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 SLC9A7Q96T83 725 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 HTATIP2Q9BUP3 242 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 DDX23Q9BUQ8 820 aaKnown RBP11.46□□□□□ -0.57
PABPN1-203ENST00000553960 DPEP3Q9H4B8 488 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 DNAJB4Q9UDY4 337 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 ANAPC7Q9UJX3 599 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 LZTS1Q9Y250 596 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 INPP5FQ9Y2H2 1132 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.46□□□□□ -0.57
PABPN1-203ENST00000553960 PTPRSQ13332 1948 aa11.46□□□□□ -0.58
PABPN1-203ENST00000553960 MYBPHLA2RUH7 354 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 CCDC188H7C350 402 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 HSF2BPO75031 334 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 GJB5O95377 273 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 MYCP01106 439 aaPredicted RBP11.45□□□□□ -0.58
PABPN1-203ENST00000553960 CALCAP01258 141 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 FGBP02675 491 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 PDGFRBP09619 1106 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 LINC00271P0C7V0 271 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 COMTP21964 271 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 TKTP29401 623 aaKnown RBP11.45□□□□□ -0.58
PABPN1-203ENST00000553960 RFC1P35251 1148 aaPredicted RBP11.45□□□□□ -0.58
PABPN1-203ENST00000553960 BRCC3P46736 316 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 AIF1P55008 147 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 NAP1L1P55209 391 aaKnown RBP11.45□□□□□ -0.58
PABPN1-203ENST00000553960 BCAR1P56945 870 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 PSMC1P62191 440 aaKnown RBP11.45□□□□□ -0.58
PABPN1-203ENST00000553960 CREMQ03060 361 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 FPGSQ05932 587 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 ZNF252P-AS1Q0IIN9 211 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 USP41Q3LFD5 358 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 TPGS2Q68CL5 300 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.45□□□□□ -0.58
PABPN1-203ENST00000553960 STRADAQ7RTN6 431 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 DDX53Q86TM3 631 aaKnown RBP11.45□□□□□ -0.58
PABPN1-203ENST00000553960 PIGZQ86VD9 579 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 PASD1Q8IV76 773 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 RHOT1Q8IXI2 618 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 SLC39A11Q8N1S5 342 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 ZMIZ2Q8NF64 920 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 CMASQ8NFW8 434 aaPredicted RBP11.45□□□□□ -0.58
PABPN1-203ENST00000553960 OR10T2Q8NGX3 314 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 SPPL2BQ8TCT7 592 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 TEKT4Q8WW24 435 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 MAIP1Q8WWC4 291 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 ZNF592Q92610 1267 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 SPATA17Q96L03 361 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 SLC2A13Q96QE2 648 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 SMOQ99835 787 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.45□□□□□ -0.582e-30■■■■□ 20.6
PABPN1-203ENST00000553960 TTPALQ9BTX7 342 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 DMAP1Q9NPF5 467 aaPredicted RBP11.45□□□□□ -0.58
PABPN1-203ENST00000553960 DDX56Q9NY93 547 aaKnown RBP11.45□□□□□ -0.58
PABPN1-203ENST00000553960 FNIP2Q9P278 1114 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 MTRRQ9UBK8 725 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 IRAK3Q9Y616 596 aa11.45□□□□□ -0.58
PABPN1-203ENST00000553960 TARSL2A2RTX5 802 aaKnown RBP11.44□□□□□ -0.58
PABPN1-203ENST00000553960 CTAGE15A4D2H0 777 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 TBKBP1A7MCY6 615 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 E5RJQ4 531 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 ENC1O14682 589 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 TNFRSF10BO14763 440 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 FSCN2O14926 492 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 FTCDO95954 541 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 SOD2P04179 222 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 KRT7P08729 469 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 CTAGE8P0CG41 777 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 CCDC130P13994 396 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 EN2P19622 333 aaPredicted RBP11.44□□□□□ -0.58
PABPN1-203ENST00000553960 PAFAH1B1P43034 410 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 OR1G1P47890 313 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 ZNF135P52742 658 aaPredicted RBP11.44□□□□□ -0.58
PABPN1-203ENST00000553960 RWDD2BP57060 319 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 RPL7AP62424 266 aaKnown RBP11.44□□□□□ -0.58
PABPN1-203ENST00000553960 MRPS5P82675 430 aaKnown RBP11.44□□□□□ -0.58
PABPN1-203ENST00000553960 DSG1Q02413 1049 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 ADCY1Q08828 1119 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 EIF4EBP2Q13542 120 aaPredicted RBP11.44□□□□□ -0.58
PABPN1-203ENST00000553960 CYP1B1Q16678 543 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
PABPN1-203ENST00000553960 TMEM240Q5SV17 173 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 DCUN1D2Q6PH85 259 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 KCNT2Q6UVM3 1135 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 DEFB128Q7Z7B8 93 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 CTAGE6Q86UF2 777 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 LRRTM3Q86VH5 581 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 GPIHBP1Q8IV16 184 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 CTAGE4Q8IX94 777 aa11.44□□□□□ -0.58
PABPN1-203ENST00000553960 COG1Q8WTW3 980 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms