RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ZNF143P52747 638 aaPredicted RBP20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 RNASELQ05823 741 aaKnown RBP20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 SIX1Q15475 284 aaPredicted RBP20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 PKN2Q16513 984 aaKnown RBP20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 ATP13A4Q4VNC1 1196 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 CLEC20AQ6ZU45 233 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 METTL23Q86XA0 190 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 ANKLE1Q8NAG6 615 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 VWCEQ96DN2 955 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 FSCN2O14926 492 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 RAD51CO43502 376 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 GRAP2O75791 330 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 TYMPP19971 482 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 CDR1P51861 262 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 LBX1P52954 281 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 ACAP1Q15027 740 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 ABI1Q8IZP0 508 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 EXD1Q8NHP7 514 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 HINFPQ9BQA5 517 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 ZNF446Q9NWS9 450 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 STIM2Q9P246 746 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 ATP11BQ9Y2G3 1177 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 TANC1Q9C0D5 1861 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 ZRANB2O95218 330 aaKnown RBP eCLIP20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 GLI1P08151 1106 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 ACADSBP45954 432 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 SLC25A11Q02978 314 aaKnown RBP20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 FAM171BQ6P995 826 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 ANKS1BQ7Z6G8 1248 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 DEFB128Q7Z7B8 93 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 PRELID2Q8N945 189 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 CLEC4CQ8WTT0 213 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 HNRNPLLQ8WVV9 542 aaKnown RBP20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 RXFP2Q8WXD0 754 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 PKMYT1Q99640 499 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 HERPUD2Q9BSE4 406 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 TTC3P53804 2025 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 SCN5AQ14524 2016 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 PDGFRAP16234 1089 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 GPD1P21695 349 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 SCNN1AP37088 669 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 OR1G1P47890 313 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 LLGL1Q15334 1064 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 OVOS1Q6IE37 1185 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 POLNQ7Z5Q5 900 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 FAM35AQ86V20 835 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 OR10T2Q8NGX3 314 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 KCTD13Q8WZ19 329 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 RUBCNQ92622 972 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 FAM193BQ96PV7 902 aaPredicted RBP20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 MED10Q9BTT4 135 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 SLITRK6Q9H5Y7 841 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 NRDE2Q9H7Z3 1164 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 KRT82Q9NSB4 513 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 TMEM30AQ9NV96 361 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 PCDHB8Q9UN66 801 aa20.55■□□□□ 0.88
RBFOX1-215ENST00000553186 TSC2P49815 1807 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 GOLGA6L10A0A0M3HER8 536 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 FAM200BP0CF97 657 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 RARAP10276 462 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 LCP1P13796 627 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 IL1R2P27930 398 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 GJC1P36383 396 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 SLC8A3P57103 927 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 INTS6LQ5JSJ4 861 aaKnown RBP20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 SLC26A9Q7LBE3 791 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 PAWRQ96IZ0 340 aaKnown RBP20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 CNPY3Q9BT09 278 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 AMACRQ9UHK6 382 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 LRFN2Q9ULH4 789 aa20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 PRG3Q9Y2Y8 225 aaPredicted RBP20.54■□□□□ 0.88
RBFOX1-215ENST00000553186 ARHGEF37A1IGU5 675 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 SH3PXD2AQ5TCZ1 1133 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 SMOQ99835 787 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 TMEM39AQ9NV64 488 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 KLHL11Q9NVR0 708 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 DPYSL4O14531 572 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 MCM3P25205 808 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 CACNA2D1P54289 1103 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 MAP3K7CLP57077 242 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 PPP2R5EQ16537 467 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 CYP1B1Q16678 543 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 LRRC26Q2I0M4 334 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 CCDC14Q49A88 953 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 ARCQ7LC44 396 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 LRRTM3Q86VH5 581 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 NPAS4Q8IUM7 802 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 RCOR2Q8IZ40 523 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 ZMIZ2Q8NF64 920 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 TMEM209Q96SK2 561 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 PLEKHA4Q9H4M7 779 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 C11orf49Q9H6J7 331 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 ASNSD1Q9NWL6 643 aa20.53■□□□□ 0.88
RBFOX1-215ENST00000553186 ZSCAN5CA6NGD5 496 aaPredicted RBP20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 HOXA2O43364 376 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 HEXIM1O94992 359 aaKnown RBP20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 CLTBP09497 229 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 RALAP11233 206 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 MIPP30301 263 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 PCK1P35558 622 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms