RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TCEAL6Q6IPX3 200 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 NETO1Q8TDF5 533 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 SCFD1Q8WVM8 642 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 TCEAL3Q969E4 200 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 CCDC127Q96BQ5 260 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 INTS4Q96HW7 963 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 FUBP3Q96I24 572 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 BLZF1Q9H2G9 400 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 TNMDQ9H2S6 317 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 AGPAT3Q9NRZ7 376 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 ZMYM5Q9UJ78 669 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 CDH9Q9ULB4 789 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 SLC8A2Q9UPR5 921 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 FRYQ5TBA9 3013 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 SOBPA7XYQ1 873 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 F8VP50 259 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 TM4SF5O14894 197 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 TNNC2P02585 160 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 ADRB1P08588 477 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 HNRNPLP14866 589 aaKnown RBP eCLIP12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 SDHBP21912 280 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 IFNAR2P48551 515 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 CYP24A1Q07973 514 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 MYO1EQ12965 1108 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 PSMD2Q13200 908 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 SNRNP35Q16560 246 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 FAM26FQ5R3K3 315 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 DPH6Q7L8W6 267 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 WDR49Q8IV35 697 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 GRAMD1CQ8IYS0 662 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 CPA6Q8N4T0 437 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 MYCBPAPQ8TBZ2 947 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 SPATA18Q8TC71 538 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 CD101Q93033 1021 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 SPATA17Q96L03 361 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 ZSCAN16Q9H4T2 348 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 SMPD4Q9NXE4 827 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 USP24Q9UPU5 2620 aa12.34□□□□□ -0.43
PRPF40B-212ENST00000551111 PLXND1Q9Y4D7 1925 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 ZNF840PA6NDX5 716 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 PCNX2A6NKB5 2137 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 K7ELQ4 463 aaPredicted RBP12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 K7EQS6 105 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 LEFTY2O00292 366 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 EIF3DO15371 548 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 POLR2DO15514 142 aaKnown RBP12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 PPP6R2O75170 966 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 EPN2O95208 641 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 ZNF806P0C7X5 589 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 CCDC192P0DO97 292 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 CHRM1P11229 460 aaPredicted RBP12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 TNNI1P19237 187 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 DRD1P21728 446 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 GNL1P36915 607 aaPredicted RBP12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 SLC6A11P48066 632 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 PGFP49763 221 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 CDH8P55286 799 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 SEC13P55735 322 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 MYL6P60660 151 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 CUL4BQ13620 913 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 PKP1Q13835 747 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 DMC1Q14565 340 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 KCNB1Q14721 858 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 PLK5Q496M5 336 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 PLA2G2CQ5R387 149 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 C4orf50Q6ZRC1 276 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 DENND5BQ6ZUT9 1274 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 HS2ST1Q7LGA3 356 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 CACNA2D4Q7Z3S7 1137 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 C12orf40Q86WS4 652 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 ATP2A3Q93084 1043 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 WBP2Q969T9 261 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 CGRRF1Q99675 332 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 C7orf25Q9BPX7 421 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 TTLL2Q9BWV7 592 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 B3GNT5Q9BYG0 378 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 ZNF518BQ9C0D4 1074 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 XYLT2Q9H1B5 865 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 DUSP15Q9H1R2 295 aaPredicted RBP12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 SLC39A2Q9NP94 309 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 ZDHHC4Q9NPG8 344 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 ARHGAP26Q9UNA1 814 aa12.33□□□□□ -0.44
PRPF40B-212ENST00000551111 CCDC163A0A0D9SF12 145 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 KIAA0391O15091 583 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 CUTAO60888 179 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 ATG13O75143 517 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 ABL1P00519 1130 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 CYP17A1P05093 508 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 TCF3P15923 654 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 PTPN1P18031 435 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 AFMP43652 599 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 IFRD2Q12894 506 aaPredicted RBP12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 TAF10Q12962 218 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 PSMD6Q15008 389 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 WDR72Q3MJ13 1102 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 AASDHQ4L235 1098 aaPredicted RBP12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 C2orf27AQ580R0 203 aa12.32□□□□□ -0.44
PRPF40B-212ENST00000551111 EMC10Q5UCC4 262 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms