RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 ELAC2Q9BQ52 826 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-208ENST00000548436 FRMD8P1Q9BZ68 369 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-208ENST00000548436 GINS2Q9Y248 185 aa19.43■□□□□ 0.7
PRPF40B-208ENST00000548436 EXOC1LA0A1B0GW35 172 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 C2CD4BA6NLJ0 364 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 DNM1LO00429 736 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 GPD1P21695 349 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 GCLCP48506 637 aaPredicted RBP19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 CTCFP49711 727 aaPredicted RBP19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 ADCY1Q08828 1119 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 MMRN1Q13201 1228 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 GRB14Q14449 540 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 TMED2Q15363 201 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 C15orf59Q2T9L4 293 aaPredicted RBP19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 ANKRD22Q5VYY1 191 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 OR6B2Q6IFH4 312 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 UNC45BQ8IWX7 931 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 CCDC13Q8IYE1 715 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 RXFP2Q8WXD0 754 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 CPT1BQ92523 772 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 CCT6BQ92526 530 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 MRPL45Q9BRJ2 306 aaKnown RBP19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 CALN1Q9BXU9 219 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 ADAMTS10Q9H324 1103 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 SNTG2Q9NY99 539 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 NME7Q9Y5B8 376 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 GOLGA6L7A0A1B0GV03 622 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 GLTPD2A6NH11 291 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 GRAP2O75791 330 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 RPL22P35268 128 aaKnown RBP19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 PCK1P35558 622 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 GTF2A2P52657 109 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 PDIA2Q13087 525 aaKnown RBP19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 ACVR2BQ13705 512 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 DGKDQ16760 1214 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 ANKRD20A8PQ5CZ79 823 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 PPP1R26Q5T8A7 1209 aaPredicted RBP19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 FBXW10Q5XX13 1052 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 CAPN12Q6ZSI9 719 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 CENPUQ71F23 418 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 RIBC1Q8N443 379 aaPredicted RBP19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 TINF2Q9BSI4 451 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 CNPY3Q9BT09 278 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 CDHR5Q9HBB8 845 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 GBA2Q9HCG7 927 aaPredicted RBP19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 KIAA1257Q9ULG3 409 aa19.42■□□□□ 0.7
PRPF40B-208ENST00000548436 DOCK3Q8IZD9 2030 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 PDCD11Q14690 1871 aaKnown RBP19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 TCP11X1B4DZS4 312 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 APOC4-APOC2K7ER74 178 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 ENDOD1O94919 500 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 APOC2P02655 101 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 PDGFRAP16234 1089 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 RGS7P49802 495 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 GOLGA7BQ2TAP0 167 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 DCAF4L1Q3SXM0 396 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 TAX1BP1Q86VP1 789 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 GDAP1Q8TB36 358 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 RSAD2Q8WXG1 361 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 EIF2AQ9BY44 585 aaKnown RBP19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 FAM49AQ9H0Q0 323 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 FAM124BQ9H5Z6 455 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 ACTL7BQ9Y614 415 aa19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 TRIP12Q14669 1992 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-208ENST00000548436 RASA4BC9J798 803 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 POC1B-GALNT4F8VUJ3 575 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 RASA4O43374 803 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 EIF3EP60228 445 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 PMF1Q6P1K2 205 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 NPNTQ6UXI9 565 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 PCGF5Q86SE9 256 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 ANKRD23Q86SG2 305 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 ACOT1Q86TX2 421 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 ANKMY2Q8IV38 441 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 PPIL6Q8IXY8 311 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 TTC39CQ8N584 583 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 TAB3Q8N5C8 712 aaPredicted RBP19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 NAT8LQ8N9F0 302 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 NPLOC4Q8TAT6 608 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 CKAP2Q8WWK9 683 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 ABHD16BQ9H3Z7 469 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 VPS37BQ9H9H4 285 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 SAMD15Q9P1V8 674 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 TUBGCP4Q9UGJ1 667 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 HES2Q9Y543 173 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 SNX9Q9Y5X1 595 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 TCRBV7S3A2A0A539 114 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 NDC80O14777 642 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 GPR32O75388 356 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 NRLP54845 237 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 CDH6P55285 790 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 ITIH4Q14624 930 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 HIF1AQ16665 826 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 CDO1Q16878 200 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 MSS51Q4VC12 460 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 PKDCCQ504Y2 493 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 FNBP1LQ5T0N5 605 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 TTC30AQ86WT1 665 aa19.4■□□□□ 0.7
PRPF40B-208ENST00000548436 TDRPQ86YL5 185 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms