RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 LRRC15Q8TF66 581 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 FCRL3Q96P31 734 aaPredicted RBP18.83■□□□□ 0.6
PVT1-220ENST00000524165 CLMPQ9H6B4 373 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 CABIN1Q9Y6J0 2220 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 MGAQ8IWI9 3026 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 UNC79Q9P2D8 2635 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 TEX51A0A1B0GUA7 166 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 SLC16A4O15374 487 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 HIP1RO75146 1068 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 HDCP19113 662 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 EIF2S3P41091 472 aaKnown RBP18.82■□□□□ 0.6
PVT1-220ENST00000524165 RPL10AP62906 217 aaKnown RBP18.82■□□□□ 0.6
PVT1-220ENST00000524165 SMAD1Q15797 465 aaKnown RBP18.82■□□□□ 0.6
PVT1-220ENST00000524165 ECM1Q16610 540 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 WDR45BQ5MNZ6 344 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 DBX2Q6ZNG2 339 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 LRRC69Q6ZNQ3 347 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 WASF1Q92558 559 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 FOXJ1Q92949 421 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 HAPLN2Q9GZV7 340 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 ZSWIM6Q9HCJ5 1215 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 ZDHHC4Q9NPG8 344 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 ARHGEF4Q9NR80 690 aa18.82■□□□□ 0.6
PVT1-220ENST00000524165 PTPN13Q12923 2485 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 ANO9A1A5B4 782 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 C2orf78A6NCI8 922 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.81■□□□□ 0.6
PVT1-220ENST00000524165 CYB561D2O14569 222 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 HLA-EP13747 358 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 PFKLP17858 780 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 TNFSF9P41273 254 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 RESTQ13127 1097 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 DHCR24Q15392 516 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 SAFBQ15424 915 aaKnown RBP eCLIP18.81■□□□□ 0.6
PVT1-220ENST00000524165 NFE2Q16621 373 aaPredicted RBP18.81■□□□□ 0.6
PVT1-220ENST00000524165 SDHAF4Q5VUM1 108 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 LEO1Q8WVC0 666 aaPredicted RBP18.81■□□□□ 0.6
PVT1-220ENST00000524165 LARP6Q9BRS8 491 aaKnown RBP18.81■□□□□ 0.6
PVT1-220ENST00000524165 ABCB6Q9NP58 842 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 TMLHEQ9NVH6 421 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 PCDHGB2Q9Y5G2 931 aa18.81■□□□□ 0.6
PVT1-220ENST00000524165 SLC9A3R1O14745 358 aaPredicted RBP18.8■□□□□ 0.6
PVT1-220ENST00000524165 FLRT2O43155 660 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 CDC45O75419 566 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 CER1O95813 267 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 NFICP08651 508 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 MATR3P43243 847 aaKnown RBP eCLIP18.8■□□□□ 0.64e-7■□□□□ 10.6
PVT1-220ENST00000524165 ZXDBP98169 803 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 MAPK7Q13164 816 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 ENOX2Q16206 610 aaKnown RBP18.8■□□□□ 0.6
PVT1-220ENST00000524165 DDR2Q16832 855 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 FILIP1Q7Z7B0 1213 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 CD302Q8IX05 232 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 PYM1Q9BRP8 204 aaKnown RBP18.8■□□□□ 0.6
PVT1-220ENST00000524165 CCSER1Q9C0I3 900 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 TM7SF3Q9NS93 570 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 KCNG1Q9UIX4 513 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 NFE2L3Q9Y4A8 694 aa18.8■□□□□ 0.6
PVT1-220ENST00000524165 KNL1Q8NG31 2342 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 A0A1B0GTW7 788 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 FAM149AA5PLN7 773 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 LEFTY2O00292 366 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 ZBTB24O43167 697 aaPredicted RBP18.79■□□□□ 0.6
PVT1-220ENST00000524165 NDUFS2O75306 463 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 MCM7P33993 719 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 CCT6AP40227 531 aaKnown RBP18.79■□□□□ 0.6
PVT1-220ENST00000524165 TSPY1Q01534 308 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 WSCD1Q658N2 575 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 JADE1Q6IE81 842 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 GPR155Q7Z3F1 870 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 C12orf40Q86WS4 652 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 ZNF513Q8N8E2 541 aaPredicted RBP18.79■□□□□ 0.6
PVT1-220ENST00000524165 RHBDD1Q8TEB9 315 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 SPIRE2Q8WWL2 714 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 GAREM1Q9H706 876 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 RPF1Q9H9Y2 349 aaKnown RBP18.79■□□□□ 0.6
PVT1-220ENST00000524165 PRDM16Q9HAZ2 1276 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 CYP8B1Q9UNU6 501 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 KIAA1024Q9UPX6 916 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 CYP46A1Q9Y6A2 500 aa18.79■□□□□ 0.6
PVT1-220ENST00000524165 PIEZO2Q9H5I5 2752 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 BTBD18B2RXH4 712 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 RRP8O43159 456 aaKnown RBP18.78■□□□□ 0.6
PVT1-220ENST00000524165 FAM189A1O60320 539 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 ADH1CP00326 375 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 MAPTP10636 758 aaKnown RBP18.78■□□□□ 0.6
PVT1-220ENST00000524165 HOXB2P14652 356 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 MATKP42679 507 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 TAF6P49848 677 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 ATP2C1P98194 919 aaPredicted RBP18.78■□□□□ 0.6
PVT1-220ENST00000524165 KDSRQ06136 332 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 RHBDF2Q6PJF5 856 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 PCSK4Q6UW60 755 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 IL27RAQ6UWB1 636 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 PHTF2Q8N3S3 785 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 TMEM161BQ8NDZ6 487 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 DNASE2BQ8WZ79 361 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 NXPE2Q96DL1 559 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 IL21RQ9HBE5 538 aa18.78■□□□□ 0.6
PVT1-220ENST00000524165 DDX19AQ9NUU7 478 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms