RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 MRPL1Q9BYD6 325 aaKnown RBP8.85□□□□□ -0.99
PCM1-212ENST00000519253 NKRFO15226 690 aaKnown RBP eCLIP8.85□□□□□ -0.99
PCM1-212ENST00000519253 PSMD10O75832 226 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 PRR5LQ6MZQ0 368 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 XRRA1Q6P2D8 792 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 CLMNQ96JQ2 1002 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 NAT9Q9BTE0 207 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 MAFGO15525 162 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 ESRRBO95718 433 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 ITGAVP06756 1048 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 PSMC3P17980 439 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 WDR4P57081 412 aaKnown RBP8.85□□□□□ -0.99
PCM1-212ENST00000519253 TBL3Q12788 808 aaKnown RBP8.85□□□□□ -0.99
PCM1-212ENST00000519253 DEFB107AQ8IZN7 70 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 SLC25A41Q8N5S1 370 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 ZC3H15Q8WU90 426 aaKnown RBP8.85□□□□□ -0.99
PCM1-212ENST00000519253 MKL1Q969V6 931 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 ACSF2Q96CM8 615 aaPredicted RBP8.85□□□□□ -0.99
PCM1-212ENST00000519253 CADM1Q9BY67 442 aaKnown RBP8.85□□□□□ -0.99
PCM1-212ENST00000519253 LRRC4CQ9HCJ2 640 aa8.85□□□□□ -0.99
PCM1-212ENST00000519253 TOPORSQ9NS56 1045 aaPredicted RBP8.85□□□□□ -0.99
PCM1-212ENST00000519253 TRDMT1O14717 391 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 BTKQ06187 659 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 SLC1A5Q15758 541 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 BNC2Q6ZN30 1099 aaPredicted RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 ANKS1BQ7Z6G8 1248 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 RAB44Q7Z6P3 723 aaPredicted RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 CCNYL1Q8N7R7 359 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 ENDOVQ8N8Q3 282 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 HDAC11Q96DB2 347 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 ZNF341Q9BYN7 854 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 C2orf40Q9H1Z8 148 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 GPRC5CQ9NQ84 441 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 KLHL8Q9P2G9 620 aaPredicted RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 IVNS1ABPQ9Y6Y0 642 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 FAM237BA0A1B0GVD1 139 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 KBTBD13C9JR72 458 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 SERPINE1P05121 402 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 ZSCAN5DPP0CG00 497 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 IL10P22301 178 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 GTF2BQ00403 316 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 STILQ15468 1287 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 SPRED3Q2MJR0 410 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 SYCP2LQ5T4T6 812 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 MAP4K3Q8IVH8 894 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 LRRC39Q96DD0 335 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 VPS39Q96JC1 886 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 NUDT2P50583 147 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 CDK7P50613 346 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 NUP107P57740 925 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 SESN2P58004 480 aaPredicted RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 OSTNP61366 133 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 ULK2Q8IYT8 1036 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 RNF217Q8TC41 542 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 DGCR14Q96DF8 476 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 CNBD2Q96M20 576 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 SLITRK1Q96PX8 696 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 STN1Q9H668 368 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 RAVER2Q9HCJ3 691 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 ACP6Q9NPH0 428 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 DMAC2Q9NW81 257 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 TRPC5Q9UL62 973 aaPredicted RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 CLK2P49760 499 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 PPIDQ08752 370 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 MAMLD1Q13495 774 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 KYAT3Q6YP21 454 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 STKLD1Q8NE28 680 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 SHCBP1LQ9BZQ2 653 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 EFCAB1Q9HAE3 211 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 IPO11Q9UI26 975 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 A0A1W2PPM1 405 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 KLHL33A6NCF5 533 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 MAGEB2O15479 319 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 RAG1P15918 1043 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 EFHC2Q5JST6 749 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 DCAF15Q66K64 600 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 ZNF606Q8WXB4 792 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 PSPC1Q8WXF1 523 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 SPOCK2Q92563 424 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 KIFC3Q9BVG8 833 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 TXLNGYQ9BZA5 131 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 ILKAPQ9H0C8 392 aaPredicted RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 DHX35Q9H5Z1 703 aaKnown RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 ZNF302Q9NR11 478 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 FBXO6Q9NRD1 293 aaPredicted RBP8.84□□□□□ -0.99
PCM1-212ENST00000519253 AP4S1Q9Y587 144 aa8.84□□□□□ -0.99
PCM1-212ENST00000519253 AFDNP55196 1824 aaKnown RBP8.84□□□□□ -1
PCM1-212ENST00000519253 TM7SF2O76062 418 aa8.83□□□□□ -1
PCM1-212ENST00000519253 APOA4P06727 396 aa8.83□□□□□ -1
PCM1-212ENST00000519253 SRGAP2CP0DJJ0 459 aa8.83□□□□□ -1
PCM1-212ENST00000519253 RALBP11234 206 aa8.83□□□□□ -1
PCM1-212ENST00000519253 BST1Q10588 318 aa8.83□□□□□ -1
PCM1-212ENST00000519253 ARCQ7LC44 396 aa8.83□□□□□ -1
PCM1-212ENST00000519253 EGFL6Q8IUX8 553 aa8.83□□□□□ -1
PCM1-212ENST00000519253 ZNF384Q8TF68 577 aa8.83□□□□□ -1
PCM1-212ENST00000519253 SNRNP27Q8WVK2 155 aaKnown RBP8.83□□□□□ -1
PCM1-212ENST00000519253 C10orf82Q8WW14 230 aa8.83□□□□□ -1
PCM1-212ENST00000519253 FETUBQ9UGM5 382 aa8.83□□□□□ -1
PCM1-212ENST00000519253 R3HDM2Q9Y2K5 976 aaKnown RBP8.83□□□□□ -1
PCM1-212ENST00000519253 FIS1Q9Y3D6 152 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms