RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 RAB30Q15771 203 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 ARL13BQ3SXY8 428 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 WDR78Q5VTH9 848 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF783Q6ZMS7 281 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 PCGF5Q86SE9 256 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 TICAM2Q86XR7 235 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 AOPEPQ8N6M6 819 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 ATP11CQ8NB49 1132 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 GRAPLQ8TC17 118 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 IFI44Q8TCB0 444 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 CCHCR1Q8TD31 782 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 NKD2Q969F2 451 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 VRK1Q99986 396 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZHX3Q9H4I2 956 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF552Q9H707 407 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 CHD7Q9P2D1 2997 aa5.46□□□□□ -1.54
HMGB1P23-201ENST00000518743 COL3A1P02461 1466 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 GBF1Q92538 1859 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 LRRC10BA6NIK2 292 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 ADCY6O43306 1168 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 PEX10O60683 326 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 UFL1O94874 794 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 CSTBP04080 98 aaKnown RBP5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 KITP10721 976 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 MTHFD1P11586 935 aaKnown RBP5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 SDHBP21912 280 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 SREBF1P36956 1147 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 ETV4P43268 484 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 EPHB4P54760 987 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 ANTXR2P58335 489 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 CREMQ03060 361 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 TARDBPQ13148 414 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 SP140Q13342 867 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 RAB32Q13637 225 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 FLYWCH1Q4VC44 716 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 ARTNQ5T4W7 220 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 SUSD4Q5VX71 490 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 HIBCHQ6NVY1 386 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 LDHAL6AQ6ZMR3 332 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 REXO1L1PQ8IX06 675 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 FAM26EQ8N5C1 309 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 SH2D3CQ8N5H7 860 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 TRAPPC12Q8WVT3 735 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 KIAA1191Q96A73 305 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 IQCDQ96DY2 449 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 FMNL2Q96PY5 1086 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 FSD1Q9BTV5 496 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 MXD3Q9BW11 206 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 TTLL2Q9BWV7 592 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 TM7SF3Q9NS93 570 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 RLIMQ9NVW2 624 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 SWAP70Q9UH65 585 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 HCFC2Q9Y5Z7 792 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 TEP1Q99973 2627 aaKnown RBP5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 HELZ2Q9BYK8 2649 aaKnown RBP5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 VPS13AQ96RL7 3174 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF462Q96JM2 2506 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 LRRC37AA6NMS7 1700 aa5.45□□□□□ -1.54
HMGB1P23-201ENST00000518743 ROCK2O75116 1388 aaKnown RBP5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 A0A1W2PPC4 97 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 CLRN2A0PK11 232 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 TBC1D4O60343 1298 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 ALDH1A2O94788 518 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 PAPLNO95428 1278 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 KNG1P01042 644 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 IDEP14735 1019 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 PRDX5P30044 214 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 SSTR4P31391 388 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 VIPR1P32241 457 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 THBS2P35442 1172 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 SLC6A9P48067 706 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 PIK3CGP48736 1102 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 SUMO3P55854 103 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 SRSF3P84103 164 aaKnown RBP5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 PTH1RQ03431 593 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 DUSP2Q05923 314 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 TBX2Q13207 712 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 PKN1Q16512 942 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 CCDC174Q6PII3 467 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 ABHD15Q6UXT9 468 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 Q6ZVL8 140 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 PPP1R42Q7Z4L9 355 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 ANKRD23Q86SG2 305 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 SKAP1Q86WV1 359 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 KIAA2013Q8IYS2 634 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 KMT2EQ8IZD2 1858 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 MYCT1Q8N699 235 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 SMARCC2Q8TAQ2 1214 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 TBC1D16Q8TBP0 767 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 GCDHQ92947 438 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF566Q969W8 418 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 DMRTA2Q96SC8 542 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 PDCD2LQ9BRP1 358 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 C11orf84Q9BUA3 381 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 SIK2Q9H0K1 926 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 BCAS3Q9H6U6 928 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZFP64Q9NPA5 681 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 JADE2Q9NQC1 790 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 PCMTD2Q9NV79 361 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms