RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 IRX1P78414 480 aaPredicted RBP19.24■□□□□ 0.67
SDC2-202ENST00000518385 MTFR1Q15390 333 aa19.24■□□□□ 0.67
SDC2-202ENST00000518385 ZNF667Q5HYK9 610 aa19.24■□□□□ 0.67
SDC2-202ENST00000518385 AGGF1Q8N302 714 aaeCLIP19.24■□□□□ 0.67
SDC2-202ENST00000518385 ZNF606Q8WXB4 792 aa19.24■□□□□ 0.67
SDC2-202ENST00000518385 KRT35Q92764 455 aa19.24■□□□□ 0.67
SDC2-202ENST00000518385 ACAP3Q96P50 834 aa19.24■□□□□ 0.67
SDC2-202ENST00000518385 TMEM237Q96Q45 408 aa19.24■□□□□ 0.67
SDC2-202ENST00000518385 ADAMTS10Q9H324 1103 aa19.24■□□□□ 0.67
SDC2-202ENST00000518385 ABCF3Q9NUQ8 709 aa19.24■□□□□ 0.67
SDC2-202ENST00000518385 GTF2IRD1Q9UHL9 959 aa19.24■□□□□ 0.67
SDC2-202ENST00000518385 PCDHGC3Q9UN70 934 aa19.24■□□□□ 0.67
SDC2-202ENST00000518385 TCP11X1B4DZS4 312 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 PYGMP11217 842 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 FGFR4P22455 802 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 RASSF2P50749 326 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 IL9RQ01113 521 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 RASA2Q15283 850 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 VSTM1Q6UX27 236 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 NME8Q8N427 588 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 CEP120Q8N960 986 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 NSMCE1Q8WV22 266 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 INPP5DQ92835 1189 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 ELMO3Q96BJ8 720 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 TSPAN18Q96SJ8 248 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 BCO2Q9BYV7 579 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 FAM49AQ9H0Q0 323 aaPredicted RBP19.23■□□□□ 0.67
SDC2-202ENST00000518385 ADAM22Q9P0K1 906 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 ITGA11Q9UKX5 1188 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 UMODL1Q5DID0 1318 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 MROH7Q68CQ1 1323 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 PCNTO95613 3336 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 TRIP12Q14669 1992 aaPredicted RBP19.23■□□□□ 0.67
SDC2-202ENST00000518385 MED7O43513 233 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 GPR32O75388 356 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 CABYRO75952 493 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 MYCNP04198 464 aaPredicted RBP19.23■□□□□ 0.67
SDC2-202ENST00000518385 CALB1P05937 261 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 STX2P32856 288 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 CDH5P33151 784 aaPredicted RBP19.23■□□□□ 0.67
SDC2-202ENST00000518385 MSH2P43246 934 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 ASPAP45381 313 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 OSTNP61366 133 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 SETDB1Q15047 1291 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 CCDC38Q502W7 563 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 SGO2Q562F6 1265 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 FAM133BQ5BKY9 247 aaKnown RBP19.23■□□□□ 0.67
SDC2-202ENST00000518385 SESTD1Q86VW0 696 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 TDRPQ86YL5 185 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 TMEM35BQ8NCS4 154 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 ATL2Q8NHH9 583 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 TTC25Q96NG3 672 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 PPP1R16BQ96T49 567 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 TSEN34Q9BSV6 310 aaKnown RBP19.23■□□□□ 0.67
SDC2-202ENST00000518385 STARD13Q9Y3M8 1113 aa19.23■□□□□ 0.67
SDC2-202ENST00000518385 ATF2P15336 505 aa19.22■□□□□ 0.67
SDC2-202ENST00000518385 EIF4BP23588 611 aaKnown RBP19.22■□□□□ 0.67
SDC2-202ENST00000518385 KRT17Q04695 432 aa19.22■□□□□ 0.67
SDC2-202ENST00000518385 TMEM132DQ14C87 1099 aa19.22■□□□□ 0.67
SDC2-202ENST00000518385 SLC10A6Q3KNW5 377 aa19.22■□□□□ 0.67
SDC2-202ENST00000518385 NUGGCQ68CJ6 796 aa19.22■□□□□ 0.67
SDC2-202ENST00000518385 PLEKHA7Q6IQ23 1121 aa19.22■□□□□ 0.67
SDC2-202ENST00000518385 ADAT2Q7Z6V5 191 aaKnown RBP19.22■□□□□ 0.67
SDC2-202ENST00000518385 CCDC89Q8N998 374 aa19.22■□□□□ 0.67
SDC2-202ENST00000518385 DNAJB3Q8WWF6 145 aa19.22■□□□□ 0.67
SDC2-202ENST00000518385 CPA5Q8WXQ8 436 aa19.22■□□□□ 0.67
SDC2-202ENST00000518385 LRRC4CQ9HCJ2 640 aa19.22■□□□□ 0.67
SDC2-202ENST00000518385 MOXD2PA6NHM9 499 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 SMIM23A6NLE4 172 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 DCTN3O75935 186 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 BRAFP15056 766 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 RRM1P23921 792 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 ALDH3A1P30838 453 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 ACLYP53396 1101 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 RBP5P82980 135 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 TAP1Q03518 808 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 MYO1EQ12965 1108 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 NAA25Q14CX7 972 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 KIZQ2M2Z5 673 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 JADE1Q6IE81 842 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 GDF6Q6KF10 455 aaPredicted RBP19.21■□□□□ 0.67
SDC2-202ENST00000518385 TAF2Q6P1X5 1199 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 CDR2LQ86X02 465 aaPredicted RBP19.21■□□□□ 0.67
SDC2-202ENST00000518385 C1orf127Q8N9H9 656 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 AGAP11Q8TF27 550 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 STAMBPL1Q96FJ0 436 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 CPB2Q96IY4 423 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 PARVAQ9NVD7 372 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 FGFR1OP2Q9NVK5 253 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 SIX4Q9UIU6 781 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 ANAPC7Q9UJX3 599 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 AGAP1Q9UPQ3 857 aa19.21■□□□□ 0.67
SDC2-202ENST00000518385 ATMINO43313 823 aaPredicted RBP19.2■□□□□ 0.66
SDC2-202ENST00000518385 UNC5CO95185 931 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 LMNAP02545 664 aaKnown RBP19.2■□□□□ 0.66
SDC2-202ENST00000518385 NFICP08651 508 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 ATP2A2P16615 1042 aaKnown RBP19.2■□□□□ 0.66
SDC2-202ENST00000518385 MMP8P22894 467 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 IFNAR2P48551 515 aa19.2■□□□□ 0.66
SDC2-202ENST00000518385 NOTUMQ6P988 496 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms