RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ACAT1P24752 427 aaKnown RBP16.77■□□□□ 0.28
HDAC6-236ENST00000498808 KIR2DL1P43626 348 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-236ENST00000498808 GFPT1Q06210 699 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-236ENST00000498808 HSF5Q4G112 596 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-236ENST00000498808 INTS6LQ5JSJ4 861 aaKnown RBP16.77■□□□□ 0.28
HDAC6-236ENST00000498808 DTHD1Q6ZMT9 781 aa16.77■□□□□ 0.28
HDAC6-236ENST00000498808 C12orf40Q86WS4 652 aa16.77■□□□□ 0.28
HDAC6-236ENST00000498808 CAMK1GQ96NX5 476 aa16.77■□□□□ 0.28
HDAC6-236ENST00000498808 ACBD6Q9BR61 282 aa16.77■□□□□ 0.28
HDAC6-236ENST00000498808 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
HDAC6-236ENST00000498808 DDX43Q9NXZ2 648 aaKnown RBP16.77■□□□□ 0.28
HDAC6-236ENST00000498808 GTF3C4Q9UKN8 822 aa16.77■□□□□ 0.28
HDAC6-236ENST00000498808 ODF2LQ9ULJ1 636 aa16.77■□□□□ 0.28
HDAC6-236ENST00000498808 TCRBV21S2A2A0A5A6 115 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 LEFTY2O00292 366 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 LAD1O00515 517 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 KAT7O95251 611 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 EOGTQ5NDL2 527 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 FILIP1Q7Z7B0 1213 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 OSTM1Q86WC4 334 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 CCDC83Q8IWF9 413 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 DEFB119Q8N690 84 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 FSIP1Q8NA03 581 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 CEP76Q8TAP6 659 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 ADAMTS14Q8WXS8 1223 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 ZNF560Q96MR9 790 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 FIZ1Q96SL8 496 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 PNKPQ96T60 521 aa16.76■□□□□ 0.27
HDAC6-236ENST00000498808 FLNBO75369 2602 aaKnown RBP16.76■□□□□ 0.27
HDAC6-236ENST00000498808 MYMKA6NI61 221 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 ARHGAP33O14559 1287 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 SCAMP3O14828 347 aaKnown RBP16.75■□□□□ 0.27
HDAC6-236ENST00000498808 HCRTO43612 131 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 NEK4P51957 841 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 ZNF131P52739 623 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 RPL6Q02878 288 aaKnown RBP16.75■□□□□ 0.27
HDAC6-236ENST00000498808 BYSLQ13895 437 aaKnown RBP16.75■□□□□ 0.27
HDAC6-236ENST00000498808 HNRNPDQ14103 355 aaKnown RBP16.75■□□□□ 0.27
HDAC6-236ENST00000498808 DHCR24Q15392 516 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 CFAP221Q4G0U5 840 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 TMEM119Q4V9L6 283 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 SCARA3Q6AZY7 606 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 ADALQ6DHV7 355 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 CRELD2Q6UXH1 353 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-236ENST00000498808 CCNI2Q6ZMN8 369 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-236ENST00000498808 SCN4BQ8IWT1 228 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 ADGRG2Q8IZP9 1017 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 PGBD3Q8N328 593 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 KCTD17Q8N5Z5 321 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 MYCT1Q8N699 235 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 PNPLA1Q8N8W4 532 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 SPATA18Q8TC71 538 aa16.75■□□□□ 0.27
HDAC6-236ENST00000498808 CCDC86Q9H6F5 360 aaKnown RBP16.75■□□□□ 0.27
HDAC6-236ENST00000498808 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.75■□□□□ 0.27
HDAC6-236ENST00000498808 DNAAF2Q9NVR5 837 aaKnown RBP16.75■□□□□ 0.27
HDAC6-236ENST00000498808 A0A0A0MRY4 1105 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 AP5Z1O43299 807 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 SH3BP5O60239 455 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 GJB3O75712 270 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 APODP05090 189 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 FTH1P19P0C7X4 201 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 SCP2P22307 547 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 EIF2DP41214 584 aaKnown RBP16.74■□□□□ 0.27
HDAC6-236ENST00000498808 WNT7BP56706 349 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 ATP2C1P98194 919 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-236ENST00000498808 ZNF33AQ06730 810 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 TRIP6Q15654 476 aaKnown RBP16.74■□□□□ 0.27
HDAC6-236ENST00000498808 MDM1Q8TC05 714 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 AGO2Q9UKV8 859 aaKnown RBP16.74■□□□□ 0.27
HDAC6-236ENST00000498808 STYXL1Q9Y6J8 313 aa16.74■□□□□ 0.27
HDAC6-236ENST00000498808 HELZ2Q9BYK8 2649 aaKnown RBP16.73■□□□□ 0.27
HDAC6-236ENST00000498808 ASXL3Q9C0F0 2248 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 TRAK2O60296 914 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 FAM13AO94988 1023 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 POLR2BP30876 1174 aaKnown RBP16.73■□□□□ 0.27
HDAC6-236ENST00000498808 PNPLA4P41247 253 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 USP46P62068 366 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 GTF2BQ00403 316 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 MYL7Q01449 175 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 KDSRQ06136 332 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 RESTQ13127 1097 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 RHBDF2Q6PJF5 856 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 GPBP1Q86WP2 473 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 SPATA2LQ8IUW3 424 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-236ENST00000498808 SLC41A1Q8IVJ1 513 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 PHTF2Q8N3S3 785 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 HNRNPLLQ8WVV9 542 aaKnown RBP16.73■□□□□ 0.27
HDAC6-236ENST00000498808 FUBP3Q96I24 572 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDAC6-236ENST00000498808 CDK5RAP3Q96JB5 506 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 LLPHQ9BRT6 129 aaKnown RBP16.73■□□□□ 0.27
HDAC6-236ENST00000498808 IKZF4Q9H2S9 585 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 PARVGQ9HBI0 331 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 ARHGEF4Q9NR80 690 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 RAXQ9Y2V3 346 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 PTPRBP23467 1997 aa16.73■□□□□ 0.27
HDAC6-236ENST00000498808 HUS1O60921 280 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 PFKLP17858 780 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 GABRG2P18507 467 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 GRIA2P42262 883 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 MAGEA11P43364 429 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms