RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 IFNAR2P48551 515 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 CDH18Q13634 790 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 PABPC1LQ4VXU2 614 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 BTBD6Q96KE9 485 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 RPGRIP1Q96KN7 1286 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 RUNDC3BQ96NL0 473 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 RPRD1AQ96P16 312 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 RAD9AQ99638 391 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 HINFPQ9BQA5 517 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 ULBP1Q9BZM6 244 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 HOMER3Q9NSC5 361 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 PCDHB8Q9UN66 801 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 CCDC66A2RUB6 948 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 MBLAC1A4D2B0 266 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 RRM1P23921 792 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 SERPINB6P35237 376 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 VARS2Q5ST30 1063 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 TMCO2Q7Z6W1 182 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 NOP9Q86U38 636 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 RSPH1Q8WYR4 309 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 NUDT5Q9UKK9 219 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 F5H5T6 163 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 DNAAF5Q86Y56 855 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 PALM2Q8IXS6 379 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 TTC13Q8NBP0 860 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 ATAD1Q8NBU5 361 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 FAM172AQ8WUF8 416 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 VPS37BQ9H9H4 285 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 THG1LQ9NWX6 298 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 SIK3Q9Y2K2 1263 aa9.91□□□□□ -0.82
GAPVD1-219ENST00000495955 F5H423 210 aaPredicted RBP9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 NEMP1O14524 444 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CCL16O15467 120 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CSH1P0DML2 217 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CSH2P0DML3 217 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 ZFXP17010 805 aaPredicted RBP9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 RABGGTBP53611 331 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 KCNMA1Q12791 1236 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 DENND1BQ6P3S1 775 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 SLC39A4Q6P5W5 647 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 GSDMBQ8TAX9 411 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 DDI1Q8WTU0 396 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 AUTS2Q8WXX7 1259 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 TOX2Q96NM4 488 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 ALG13Q9NP73 1137 aaKnown RBP9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 E5RJQ4 531 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 F9P00740 461 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CLCN1P35523 988 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 ZCWPW2Q504Y3 356 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 MARCH8Q5T0T0 291 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 B3GNT9Q6UX72 402 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.9□□□□□ -0.821e-6■■□□□ 13.8
GAPVD1-219ENST00000495955 PGBD3Q8N328 593 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CCDC63Q8NA47 563 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 ACSF2Q96CM8 615 aaPredicted RBP9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CATSPERBQ9H7T0 1116 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 ARFGAP3Q9NP61 516 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CNTN3Q9P232 1028 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 TRIM10Q9UDY6 481 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 HAS3O00219 553 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 GZMAP12544 262 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 WEE1P30291 646 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 MARSP56192 900 aaKnown RBP9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 YWHAZP63104 245 aaKnown RBP9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 ITIH3Q06033 890 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 ZNF235Q14590 738 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CNGA2Q16280 664 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CAPN12Q6ZSI9 719 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 HERC6Q8IVU3 1022 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 FAM126BQ8IXS8 530 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 NDUFAF2Q8N183 169 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 TMEM175Q9BSA9 504 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 OLA1Q9NTK5 396 aaKnown RBP9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CDC23Q9UJX2 597 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 TFR2Q9UP52 801 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 CDK5RAP2Q96SN8 1893 aa9.9□□□□□ -0.82
GAPVD1-219ENST00000495955 TIGD5Q53EQ6 642 aa9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 PPP1R26Q5T8A7 1209 aaPredicted RBP9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 HEATR6Q6AI08 1181 aaKnown RBP9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 FAM35AQ86V20 835 aa9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 ZC3H18Q86VM9 953 aaKnown RBP9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 NUP93Q8N1F7 819 aa9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 ADAM32Q8TC27 787 aa9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 RXFP2Q8WXD0 754 aa9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 TSC1Q92574 1164 aa9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 DMAC2Q9NW81 257 aa9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 LMCD1Q9NZU5 365 aa9.9□□□□□ -0.83
GAPVD1-219ENST00000495955 COMTP21964 271 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 KPNA1P52294 538 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 C2orf54Q08AI8 447 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 SEPT6Q14141 434 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 TAS1R3Q7RTX0 852 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 FAM131BQ86XD5 332 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 CARNMT1Q8N4J0 409 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 PPP1R14CQ8TAE6 165 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 TGS1Q96RS0 853 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 AIPL1Q9NZN9 384 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 LRRC10BA6NIK2 292 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 NFKBIAP25963 317 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms