RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 IL37Q9NZH6 218 aa11.74□□□□□ -0.53
CPSF7-212ENST00000489728 A0A1W2PRU2 124 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 FAM92AA1XBS5 289 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 PES1O00541 588 aaKnown RBP11.73□□□□□ -0.53
CPSF7-212ENST00000489728 TNFRSF10BO14763 440 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 ECI2O75521 394 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 F11P03951 625 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 CDK11BP21127 795 aaKnown RBP11.73□□□□□ -0.53
CPSF7-212ENST00000489728 COPB1P53618 953 aaKnown RBP11.73□□□□□ -0.53
CPSF7-212ENST00000489728 CACNA2D1P54289 1103 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 BCAT1P54687 386 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 ORC1Q13415 861 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 MTMR3Q13615 1198 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 IQCB1Q15051 598 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 ZNF394Q53GI3 561 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 PPP1R26Q5T8A7 1209 aaPredicted RBP11.73□□□□□ -0.53
CPSF7-212ENST00000489728 CLEC20AQ6ZU45 233 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 RRAGAQ7L523 313 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 ANKRD52Q8NB46 1076 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 RBBP8NLQ8NC74 664 aaPredicted RBP11.73□□□□□ -0.53
CPSF7-212ENST00000489728 NUP210Q8TEM1 1887 aaPredicted RBP11.73□□□□□ -0.53
CPSF7-212ENST00000489728 SHC3Q92529 594 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 MRPS31Q92665 395 aaKnown RBP11.73□□□□□ -0.53
CPSF7-212ENST00000489728 SMARCD2Q92925 531 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 TCEAL4Q96EI5 215 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 ASB16Q96NS5 453 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 SLITRK1Q96PX8 696 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 DUSP16Q9BY84 665 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 ATXN3LQ9H3M9 355 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 FBXO44Q9H4M3 255 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 SIX2Q9NPC8 291 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 TMEM30AQ9NV96 361 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 OBP2AQ9NY56 170 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 HESX1Q9UBX0 185 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 SORCS3Q9UPU3 1222 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 PCDHB4Q9Y5E5 795 aa11.73□□□□□ -0.53
CPSF7-212ENST00000489728 DOCK6Q96HP0 2047 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 DENND4CQ5VZ89 1909 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 OBSL1O75147 1896 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 PI4K2BG5E9Z4 385 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 O00370 1275 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 DCXO43602 365 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 SETSIPP0DME0 302 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 SP100P23497 879 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-212ENST00000489728 YWHAQP27348 245 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 ADORA2BP29275 332 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 TUBP50607 506 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 SLC5A3P53794 718 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 BST2Q10589 180 aaKnown RBP11.72□□□□□ -0.53
CPSF7-212ENST00000489728 TDGQ13569 410 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 TEAD2Q15562 447 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 CNGA2Q16280 664 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 SNX30Q5VWJ9 437 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 LCLAT1Q6UWP7 414 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 APTXQ7Z2E3 356 aaKnown RBP11.72□□□□□ -0.53
CPSF7-212ENST00000489728 TMEM150AQ86TG1 271 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 ZMIZ2Q8NF64 920 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 GPR152Q8TDT2 470 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 ING5Q8WYH8 240 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 KAT5Q92993 513 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 ELSPBP1Q96BH3 223 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 ERGIC2Q96RQ1 377 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 SMOQ99835 787 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 VPS16Q9H269 839 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 TASP1Q9H6P5 420 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 KCNK12Q9HB15 430 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 LIMD1Q9UGP4 676 aa11.72□□□□□ -0.53
CPSF7-212ENST00000489728 MAGED2Q9UNF1 606 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-212ENST00000489728 XPO1O14980 1071 aaKnown RBP11.71□□□□□ -0.53
CPSF7-212ENST00000489728 MED7O43513 233 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 TADA3O75528 432 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 KRT5P13647 590 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 UCHL3P15374 230 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 CD19P15391 556 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 CDR1P51861 262 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 MAP3K7CLP57077 242 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 BPIFB4P59827 614 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 KCNMA1Q12791 1236 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 ZNF268Q14587 947 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-212ENST00000489728 FILIP1LQ4L180 1135 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 GPR158Q5T848 1215 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 KLHDC7AQ5VTJ3 777 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 SDHAF4Q5VUM1 108 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 DPY19L2P1Q6NXN4 242 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 MON1AQ86VX9 555 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 KIAA1958Q8N8K9 716 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 ZSCAN18Q8TBC5 510 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-212ENST00000489728 DEPDC1BQ8WUY9 529 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 MCRS1Q96EZ8 462 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 KCNK16Q96T55 309 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 NAA15Q9BXJ9 866 aaKnown RBP11.71□□□□□ -0.53
CPSF7-212ENST00000489728 SLITRK6Q9H5Y7 841 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 KIF9Q9HAQ2 790 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 CBX8Q9HC52 389 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 ZFP14Q9HCL3 533 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 TRPM5Q9NZQ8 1165 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 DNAJC12Q9UKB3 198 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 TSPAN16Q9UKR8 245 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 DUSP12Q9UNI6 340 aa11.71□□□□□ -0.53
CPSF7-212ENST00000489728 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms