RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 PAQR9Q6ZVX9 377 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 MON1AQ86VX9 555 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 CCDC105Q8IYK2 499 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 C12orf29Q8N999 325 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 PJA1Q8NG27 643 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 CSGALNACT1Q8TDX6 532 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 TAF4BQ92750 862 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 DNASE1L2Q92874 299 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 USP13Q92995 863 aaPredicted RBP8.8□□□□□ -1
HDAC6-221ENST00000477561 E2F7Q96AV8 911 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 TRMT2BQ96GJ1 504 aaKnown RBP8.8□□□□□ -1
HDAC6-221ENST00000477561 DHTKD1Q96HY7 919 aaPredicted RBP8.8□□□□□ -1
HDAC6-221ENST00000477561 TNIP3Q96KP6 325 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 MYRFLQ96LU7 910 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 TWNKQ96RR1 684 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 SLC22A12Q96S37 553 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 KCNK16Q96T55 309 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 PRRX2Q99811 253 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 IMPG2Q9BZV3 1241 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 UXTQ9UBK9 157 aaPredicted RBP8.8□□□□□ -1
HDAC6-221ENST00000477561 NDRG2Q9UN36 371 aaKnown RBP8.8□□□□□ -1
HDAC6-221ENST00000477561 CTNND2Q9UQB3 1225 aa8.8□□□□□ -1
HDAC6-221ENST00000477561 MUC6Q6W4X9 2439 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 C2orf78A6NCI8 922 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 SHISA7A6NL88 538 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 PSMA7O14818 248 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 TRIM66O15016 1216 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 CHADO15335 359 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 SLC16A3O15427 465 aaKnown RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 AP1G2O75843 785 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 TARSP26639 723 aaKnown RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 ADORA2BP29275 332 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 GTF2H1P32780 548 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 ZNF165P49910 485 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 MXI1P50539 228 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 KPNA1P52294 538 aaPredicted RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 TPM4P67936 248 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 LRRC63Q05C16 580 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 TNK2Q07912 1038 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 FCHO2Q0JRZ9 810 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 MORC3Q14149 939 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 CBWD6Q4V339 395 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 ZNF394Q53GI3 561 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 CT47A1Q5JQC4 288 aaPredicted RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 CBWD3Q5JTY5 395 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 CBWD5Q5RIA9 395 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 TRIM68Q6AZZ1 485 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 ZNF852Q6ZMS4 543 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 FAM35AQ86V20 835 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 ALYREFQ86V81 257 aaKnown RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 ZC3H3Q8IXZ2 948 aaKnown RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 FUKQ8N0W3 1084 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 CELF5Q8N6W0 485 aaKnown RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 ARL14EPQ8N8R7 260 aaPredicted RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 MLKLQ8NB16 471 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 CCDC150Q8NCX0 1101 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 RNF214Q8ND24 703 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 FBXL13Q8NEE6 735 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 RIN3Q8TB24 985 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 SLC2A14Q8TDB8 520 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 BPIFB1Q8TDL5 484 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 NELFBQ8WX92 580 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 SPOCK2Q92563 424 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 TATDN2Q93075 761 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 SPATA17Q96L03 361 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 C8orf48Q96LL4 319 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 DUSP9Q99956 384 aaKnown RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 BPIFA3Q9BQP9 254 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 DDX23Q9BUQ8 820 aaKnown RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 BCO2Q9BYV7 579 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 ELOVL4Q9GZR5 314 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 NIF3L1Q9GZT8 377 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 LTB4R2Q9NPC1 389 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 GKN1Q9NS71 199 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 FAM49BQ9NUQ9 324 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 TDP1Q9NUW8 608 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 RAB20Q9NX57 234 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 GTSE1Q9NYZ3 720 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 DLGAP2Q9P1A6 1054 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 ARMCX3Q9UH62 379 aaPredicted RBP8.79□□□□□ -1
HDAC6-221ENST00000477561 PIAS3Q9Y6X2 628 aa8.79□□□□□ -1
HDAC6-221ENST00000477561 TRAV19A0A0A6YYK7 116 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 BECN2A8MW95 431 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 GOLGA6L19H0YKK7 550 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 ARNTLO00327 626 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 STX10O60499 249 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 BEST1O76090 585 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 CKMP06732 381 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 HDCP19113 662 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 DDX6P26196 483 aaKnown RBP eCLIP8.78□□□□□ -1
HDAC6-221ENST00000477561 WEE1P30291 646 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 DEKP35659 375 aaKnown RBP8.78□□□□□ -1
HDAC6-221ENST00000477561 NUBP1P53384 320 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 MAP3K7CLP57077 242 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 ENPEPQ07075 957 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 LRMPQ12912 555 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 TAF10Q12962 218 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 ANGPT1Q15389 498 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 CCDC40Q4G0X9 1142 aa8.78□□□□□ -1
HDAC6-221ENST00000477561 ARHGAP29Q52LW3 1261 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms