RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 RGS2P41220 211 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 GALK1P51570 392 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 CHN2P52757 468 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 GRM2Q14416 872 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 HIC1Q14526 733 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 GRAMD1BQ3KR37 738 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 SH2D4BQ5SQS7 431 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 GCNAQ96QF7 691 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 DHRS4Q9BTZ2 278 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 CYP4F11Q9HBI6 524 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 DNAJB4Q9UDY4 337 aa14.37□□□□□ -0.11
NPHP4-207ENST00000470763 TMEM150BA6NC51 233 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 SPDYE16A6NNV3 312 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 I3L4J1 428 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 CYB561D2O14569 222 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 RGL2O15211 777 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 ATP6V1B1P15313 513 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 STIP1P31948 543 aaKnown RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 SERPINB6P35237 376 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 RPL7AP62424 266 aaKnown RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 MAMLD1Q13495 774 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 MYBPC2Q14324 1141 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 EFHC1Q5JVL4 640 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 DGCR14Q96DF8 476 aaKnown RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 CLMNQ96JQ2 1002 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 GPRC5CQ9NQ84 441 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 ZBTB21Q9ULJ3 1066 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 PCDHGB4Q9UN71 923 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 PCDHGB5Q9Y5G0 923 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 IKBKGQ9Y6K9 419 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 TNRC6CQ9HCJ0 1690 aaKnown RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 MYOCOSA0A1B0GUC4 107 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 VCPP55072 806 aaKnown RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 SH3BGRP55822 239 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 KLHDC10Q6PID8 442 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 MON1BQ7L1V2 547 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 HAUS6Q7Z4H7 955 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 CEP70Q8NHQ1 597 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 CPT1BQ92523 772 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 MKL1Q969V6 931 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 USP29Q9HBJ7 922 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 ZDHHC7Q9NXF8 308 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 KCNK4Q9NYG8 393 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 PTTG2Q9NZH5 202 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 IVNS1ABPQ9Y6Y0 642 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 H0YIN7 160 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 ATP9BO43861 1147 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 HNRNPCP07910 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 SMIM18P0DKX4 95 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 NRLP54845 237 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 BTKQ06187 659 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 OASLQ15646 514 aaKnown RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 FAM91A1Q658Y4 838 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 LMBRD2Q68DH5 695 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 DUS1LQ6P1R4 473 aaKnown RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 PAOXQ6QHF9 649 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 FAM163AQ96GL9 167 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 SRPK1Q96SB4 655 aaKnown RBP14.36□□□□□ -0.11
NPHP4-207ENST00000470763 KIFC3Q9BVG8 833 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 CCDC106Q9BWC9 280 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 GRIP2Q9C0E4 1043 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 CNTN3Q9P232 1028 aa14.36□□□□□ -0.11
NPHP4-207ENST00000470763 ARP10275 920 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 GTF2IP78347 998 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 ZNF200P98182 395 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-207ENST00000470763 FOLH1Q04609 750 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 CHI3L2Q15782 390 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 KBTBD12Q3ZCT8 623 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 UGT2A3Q6UWM9 527 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 IGDCC3Q8IVU1 814 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 SLF2Q8IX21 1173 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 SLC13A1Q9BZW2 595 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 WWP1Q9H0M0 922 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 GMEB1Q9Y692 573 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 CAPN8A6NHC0 703 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 COPEO14579 308 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 TMEM63AO94886 807 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 SCNN1DP51172 638 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 GPC3P51654 580 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 ANKRD20A4Q4UJ75 823 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 B3GNT6Q6ZMB0 384 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 ZCCHC23Q6ZST2 131 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 SV2AQ7L0J3 742 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 METTL25Q8N6Q8 603 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 PRICKLE1Q96MT3 831 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-207ENST00000470763 ZNF577Q9BSK1 485 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 C20orf27Q9GZN8 174 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 PCDH9Q9HC56 1237 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 SOX13Q9UN79 622 aa14.35□□□□□ -0.11
NPHP4-207ENST00000470763 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-207ENST00000470763 IQANK1A0A1B0GTG1 560 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 INHBAP08476 426 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 CCDC166P0CW27 439 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 CPOXP36551 454 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 PEX3P56589 373 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 PSMC5P62195 406 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 CCNIQ14094 377 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 NADK2Q4G0N4 442 aa14.34□□□□□ -0.11
NPHP4-207ENST00000470763 TCHHL1Q5QJ38 904 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-207ENST00000470763 LIN9Q5TKA1 542 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms