RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 TRMT5Q32P41 509 aaKnown RBP8.3□□□□□ -1.08
TPM3-215ENST00000469717 Q4G0T1 1027 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 UGT2A3Q6UWM9 527 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 TRIM67Q6ZTA4 783 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 HPS6Q86YV9 775 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 SMC1BQ8NDV3 1235 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 STKLD1Q8NE28 680 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 IWS1Q96ST2 819 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 POLR3CQ9BUI4 534 aaPredicted RBP8.3□□□□□ -1.08
TPM3-215ENST00000469717 VPS11Q9H270 941 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 TUT1Q9H6E5 874 aaKnown RBP8.3□□□□□ -1.08
TPM3-215ENST00000469717 TDRD3Q9H7E2 651 aaKnown RBP8.3□□□□□ -1.08
TPM3-215ENST00000469717 UGT1A7Q9HAW7 530 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 UGT1A10Q9HAW8 530 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 UGT1A8Q9HAW9 530 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 SENP1Q9P0U3 644 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 IGKV6D-41A0A0C4DH26 115 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 LOC100653049A0A140TA62 436 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 SPECC1L-ADORA2AF8WAN1 911 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 KRT34O76011 436 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 MT-ND3P03897 115 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 TM4SF1P30408 202 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 SHMT1P34896 483 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 SLC1A1P43005 524 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 SLC18A1P54219 525 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 ADARP55265 1226 aaKnown RBP8.3□□□□□ -1.08
TPM3-215ENST00000469717 FOLH1Q04609 750 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 MPP3Q13368 585 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 KBTBD12Q3ZCT8 623 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 RABGAP1LQ5R372 815 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 CENPUQ71F23 418 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 OTOP1Q7RTM1 612 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 AMIGO3Q86WK7 504 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 MAP7D3Q8IWC1 876 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 PIP4K2CQ8TBX8 421 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 LRRN4Q8WUT4 740 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 PRICKLE1Q96MT3 831 aaPredicted RBP8.3□□□□□ -1.08
TPM3-215ENST00000469717 RNF181Q9P0P0 153 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 IVNS1ABPQ9Y6Y0 642 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 MYPNQ86TC9 1320 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 SLC16A4O15374 487 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 LYPLA1O75608 230 aaPredicted RBP8.3□□□□□ -1.08
TPM3-215ENST00000469717 PROSCO94903 275 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 GDF11O95390 407 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 TFPTP0C1Z6 253 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 RAG1P15918 1043 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 NAT1P18440 290 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 CPOXP36551 454 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 GMPRP36959 345 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 TMPRSS15P98073 1019 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 GABPAQ06546 454 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 CETN1Q12798 172 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 PTK7Q13308 1070 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 SMTNL2Q2TAL5 461 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 ADGRD1Q6QNK2 874 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 TMC7Q7Z402 723 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 IGLV3-22A0A075B6J6 115 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 RBM47A0AV96 593 aaKnown RBP8.29□□□□□ -1.08
TPM3-215ENST00000469717 F8VP50 259 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 F8W8V4 182 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 ZNF189O75820 626 aaPredicted RBP8.29□□□□□ -1.08
TPM3-215ENST00000469717 UNGP13051 313 aaPredicted RBP8.29□□□□□ -1.08
TPM3-215ENST00000469717 VARSP26640 1264 aaKnown RBP8.29□□□□□ -1.08
TPM3-215ENST00000469717 PMLP29590 882 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 SLC5A2P31639 672 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CHN2P52757 468 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 SOX10P56693 466 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CBX3Q13185 183 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CHI3L2Q15782 390 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CCDC142Q17RM4 750 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 RSPH3Q86UC2 560 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CPNE9Q8IYJ1 553 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 ALLCQ8N6M5 410 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 GAB3Q8WWW8 586 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CPT1BQ92523 772 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CNBD2Q96M20 576 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CSRNP1Q96S65 589 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CD209Q9NNX6 404 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 TTLL13PA6NNM8 815 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 H3BSA7 217 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CFBP00751 764 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 PROCP04070 461 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 KRT1P04264 644 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 MFAP3P55082 362 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 COG7P83436 770 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 HNRNPDQ14103 355 aaKnown RBP8.29□□□□□ -1.08
TPM3-215ENST00000469717 C6orf163Q5TEZ5 329 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 ARHGAP24Q8N264 748 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 BBOF1Q8ND07 529 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CXorf38Q8TB03 319 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 SRPK1Q96SB4 655 aaKnown RBP8.29□□□□□ -1.08
TPM3-215ENST00000469717 PRPF18Q99633 342 aaKnown RBP8.29□□□□□ -1.08
TPM3-215ENST00000469717 LXNQ9BS40 222 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 SUN2Q9UH99 717 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 TAGLN3Q9UI15 199 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 SLC24A2Q9UI40 661 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 INPP5FQ9Y2H2 1132 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 DAGLAQ9Y4D2 1042 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 PCDHAC2Q9Y5I4 1007 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CLPTM1O96005 669 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms