RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TMEM30AQ9NV96 361 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 THG1LQ9NWX6 298 aaKnown RBP10.83□□□□□ -0.68
SF3A3-204ENST00000462258 GTSE1Q9NYZ3 720 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 EHD2Q9NZN4 543 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 HMGXB4Q9UGU5 601 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 HOOK1Q9UJC3 728 aaKnown RBP10.83□□□□□ -0.68
SF3A3-204ENST00000462258 ZFHX2Q9C0A1 2572 aaPredicted RBP10.82□□□□□ -0.68
SF3A3-204ENST00000462258 C2orf78A6NCI8 922 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 SPECC1L-ADORA2AF8WAN1 911 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 CLDN5O00501 218 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 KINO60870 393 aaKnown RBP10.82□□□□□ -0.68
SF3A3-204ENST00000462258 USP17L7P0C7H9 530 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 SP9P0CG40 484 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 EPB41P11171 864 aaKnown RBP10.82□□□□□ -0.68
SF3A3-204ENST00000462258 CCNE1P24864 410 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 CTHP32929 405 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 MXI1P50539 228 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 TNK2Q07912 1038 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 PPP3CAQ08209 521 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 IFRD2Q12894 506 aaPredicted RBP10.82□□□□□ -0.68
SF3A3-204ENST00000462258 ORC1Q13415 861 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 MTF1Q14872 753 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 ZNF77Q15935 545 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 COBLL1Q53SF7 1204 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 ZC3H14Q6PJT7 736 aaKnown RBP10.82□□□□□ -0.68
SF3A3-204ENST00000462258 ASCL5Q7RTU5 278 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 RALGPS2Q86X27 583 aaPredicted RBP10.82□□□□□ -0.68
SF3A3-204ENST00000462258 MAML2Q8IZL2 1156 aaPredicted RBP10.82□□□□□ -0.68
SF3A3-204ENST00000462258 RIN3Q8TB24 985 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 TAS1R2Q8TE23 839 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 NKD2Q969F2 451 aaPredicted RBP10.82□□□□□ -0.68
SF3A3-204ENST00000462258 EEF2KMTQ96G04 330 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 SMARCD1Q96GM5 515 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 SLC22A12Q96S37 553 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 TSG101Q99816 390 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 IER2Q9BTL4 223 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 MED10Q9BTT4 135 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 TTLL2Q9BWV7 592 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 B3GNT5Q9BYG0 378 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 CHRDQ9H2X0 955 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 TMEM8AQ9HCN3 771 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 DMAP1Q9NPF5 467 aaPredicted RBP10.82□□□□□ -0.68
SF3A3-204ENST00000462258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.82□□□□□ -0.685e-11■■■■■ 186.3
SF3A3-204ENST00000462258 KRT82Q9NSB4 513 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 R4GN57 208 aa10.82□□□□□ -0.68
SF3A3-204ENST00000462258 CETN3O15182 167 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 SLC16A3O15427 465 aaKnown RBP10.81□□□□□ -0.68
SF3A3-204ENST00000462258 CCDC130P13994 396 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 PRCPP42785 496 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 PDE6CP51160 858 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 NDST1P52848 882 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 INCA1Q0VD86 236 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 MTAPQ13126 283 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 FZD5Q13467 585 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 LRRC32Q14392 662 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 ITPRIPL2Q3MIP1 535 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 DCAF17Q5H9S7 520 aaPredicted RBP10.81□□□□□ -0.68
SF3A3-204ENST00000462258 KRT39Q6A163 491 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 TRIM68Q6AZZ1 485 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 CC2D1AQ6P1N0 951 aaPredicted RBP10.81□□□□□ -0.68
SF3A3-204ENST00000462258 TXNDC11Q6PKC3 985 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 ACOT1Q86TX2 421 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 UNC93AQ86WB7 457 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 ARL14EPQ8N8R7 260 aaPredicted RBP10.81□□□□□ -0.68
SF3A3-204ENST00000462258 CCDC150Q8NCX0 1101 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 TTC16Q8NEE8 873 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 SPATA20Q8TB22 786 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 SLITRK1Q96PX8 696 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 NIF3L1Q9GZT8 377 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 EBF3Q9H4W6 596 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 APOBEC3GQ9HC16 384 aaKnown RBP10.81□□□□□ -0.68
SF3A3-204ENST00000462258 HPS4Q9NQG7 708 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 PRMT8Q9NR22 394 aaPredicted RBP10.81□□□□□ -0.68
SF3A3-204ENST00000462258 TRPM5Q9NZQ8 1165 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 GCNT4Q9P109 453 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 FBXO4Q9UKT5 387 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 CIZ1Q9ULV3 898 aaPredicted RBP10.81□□□□□ -0.68
SF3A3-204ENST00000462258 PCDHA5Q9Y5H7 936 aa10.81□□□□□ -0.68
SF3A3-204ENST00000462258 TRIM49BA6NDI0 452 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 AP1G2O75843 785 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 RTN3O95197 1032 aaPredicted RBP10.8□□□□□ -0.68
SF3A3-204ENST00000462258 CHRNB1P11230 501 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 PFKLP17858 780 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 TRIM21P19474 475 aaKnown RBP10.8□□□□□ -0.68
SF3A3-204ENST00000462258 GTF2H1P32780 548 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 SLC5A3P53794 718 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 PMS1P54277 932 aaKnown RBP10.8□□□□□ -0.68
SF3A3-204ENST00000462258 CSTF1Q05048 431 aaKnown RBP10.8□□□□□ -0.68
SF3A3-204ENST00000462258 LRRC63Q05C16 580 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 STIM1Q13586 685 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 RUNX3Q13761 415 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 PON2Q15165 354 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 PDGFRLQ15198 375 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 ZNF528Q3MIS6 628 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 TCERG1LQ5VWI1 586 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 ZC3H3Q8IXZ2 948 aaKnown RBP10.8□□□□□ -0.68
SF3A3-204ENST00000462258 FUKQ8N0W3 1084 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 ADSSL1Q8N142 457 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 NUP93Q8N1F7 819 aa10.8□□□□□ -0.68
SF3A3-204ENST00000462258 SLC2A14Q8TDB8 520 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms