RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 HLA-DRAP01903 254 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 CKMP06732 381 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 CHRNB1P11230 501 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 KRT13P13646 458 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 PSMC2P35998 433 aaKnown RBP20.14■□□□□ 0.81
COL5A1-203ENST00000460264 ENPEPQ07075 957 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 MTAPQ13126 283 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 ITPRIPL2Q3MIP1 535 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 ZC3H14Q6PJT7 736 aaKnown RBP20.14■□□□□ 0.81
COL5A1-203ENST00000460264 PRMT8Q9NR22 394 aaPredicted RBP20.14■□□□□ 0.81
COL5A1-203ENST00000460264 GKN1Q9NS71 199 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 EHD2Q9NZN4 543 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 USP17L7P0C7H9 530 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 ASPAP45381 313 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 GCLMP48507 274 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 PPP3CAQ08209 521 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 ADAM9Q13443 819 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 ZNF528Q3MIS6 628 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 WDR44Q5JSH3 913 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 SPOPLQ6IQ16 392 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 FAM35AQ86V20 835 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 ARL14EPQ8N8R7 260 aaPredicted RBP20.13■□□□□ 0.81
COL5A1-203ENST00000460264 TNIP3Q96KP6 325 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 GSDMAQ96QA5 445 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 CYP2S1Q96SQ9 504 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 IER2Q9BTL4 223 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 LMAN1LQ9HAT1 526 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 HPS4Q9NQG7 708 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 GCNT4Q9P109 453 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 HMGXB4Q9UGU5 601 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 CFAP54Q96N23 3096 aa20.13■□□□□ 0.81
COL5A1-203ENST00000460264 GVINP1Q7Z2Y8 2422 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 ATP8B3O60423 1300 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 PRCPP42785 496 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 CSTF1Q05048 431 aaKnown RBP20.12■□□□□ 0.81
COL5A1-203ENST00000460264 USP4Q13107 963 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 ZNF77Q15935 545 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 ZNF658Q5TYW1 1059 aaPredicted RBP20.12■□□□□ 0.81
COL5A1-203ENST00000460264 TRIM68Q6AZZ1 485 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 ACOT1Q86TX2 421 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 SPATA20Q8TB22 786 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 TAS1R2Q8TE23 839 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 ERCC4Q92889 916 aaPredicted RBP20.12■□□□□ 0.81
COL5A1-203ENST00000460264 EEF2KMTQ96G04 330 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 TIGD1Q96MW7 591 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 SEMA4AQ9H3S1 761 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 EBF3Q9H4W6 596 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 PCDHA5Q9Y5H7 936 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 ZNF292O60281 2723 aa20.12■□□□□ 0.81
COL5A1-203ENST00000460264 MYO16Q9Y6X6 1858 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 SMC2O95347 1197 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 NDST1P52848 882 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 MCCD1P59942 119 aaPredicted RBP20.11■□□□□ 0.81
COL5A1-203ENST00000460264 RUNX3Q13761 415 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 LRRC32Q14392 662 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 MTF1Q14872 753 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 COBLL1Q53SF7 1204 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 CC2D1AQ6P1N0 951 aaPredicted RBP20.11■□□□□ 0.81
COL5A1-203ENST00000460264 MAMSTRQ6ZN01 415 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 PAQR9Q6ZVX9 377 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 IMPG2Q9BZV3 1241 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 MMRN2Q9H8L6 949 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 TMEM8AQ9HCN3 771 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL5A1-203ENST00000460264 TRPM5Q9NZQ8 1165 aa20.11■□□□□ 0.81
COL5A1-203ENST00000460264 PTPRZ1P23471 2315 aaPredicted RBP20.11■□□□□ 0.81
COL5A1-203ENST00000460264 ZNF840PA6NDX5 716 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 OTOL1A6NHN0 477 aaPredicted RBP20.1■□□□□ 0.81
COL5A1-203ENST00000460264 ARSAP15289 507 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 PFKLP17858 780 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 HDCP19113 662 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 PDE6CP51160 858 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 ORC1Q13415 861 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 GAS6Q14393 721 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 PON2Q15165 354 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 PDGFRLQ15198 375 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 UNC93AQ86WB7 457 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 FUKQ8N0W3 1084 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 SH3RF2Q8TEC5 729 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 SMARCE1Q969G3 411 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 CHFRQ96EP1 664 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 SMARCD1Q96GM5 515 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 KCNK16Q96T55 309 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 MED10Q9BTT4 135 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 APOBEC3GQ9HC16 384 aaKnown RBP20.1■□□□□ 0.81
COL5A1-203ENST00000460264 DMAP1Q9NPF5 467 aaPredicted RBP20.1■□□□□ 0.81
COL5A1-203ENST00000460264 KRT82Q9NSB4 513 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 RBM12Q9NTZ6 932 aaKnown RBP20.1■□□□□ 0.81
COL5A1-203ENST00000460264 HOOK1Q9UJC3 728 aaKnown RBP20.1■□□□□ 0.81
COL5A1-203ENST00000460264 ARHGAP26Q9UNA1 814 aa20.1■□□□□ 0.81
COL5A1-203ENST00000460264 FRYLO94915 3013 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 EPB41P11171 864 aaKnown RBP20.09■□□□□ 0.81
COL5A1-203ENST00000460264 CCDC130P13994 396 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 TCF3P15923 654 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 GTF2H1P32780 548 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 PPP3CCP48454 512 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 INCA1Q0VD86 236 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 IFRD2Q12894 506 aaPredicted RBP20.09■□□□□ 0.81
COL5A1-203ENST00000460264 TAF10Q12962 218 aa20.09■□□□□ 0.81
COL5A1-203ENST00000460264 CCINQ13939 588 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms