RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 XPO1O14980 1071 aaKnown RBP11.32□□□□□ -0.6
UBR4-208ENST00000459947 FBXO21O94952 628 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 ACO1P21399 889 aaKnown RBP11.32□□□□□ -0.6
UBR4-208ENST00000459947 NCAPHQ15003 741 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 ZNF677Q86XU0 584 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 SHKBP1Q8TBC3 707 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 FGF13Q92913 245 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 PCMTD1Q96MG8 357 aaPredicted RBP11.32□□□□□ -0.6
UBR4-208ENST00000459947 CRISPLD1Q9H336 500 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 ZFP14Q9HCL3 533 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 THG1LQ9NWX6 298 aaKnown RBP11.32□□□□□ -0.6
UBR4-208ENST00000459947 DNAJC12Q9UKB3 198 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 F8VP50 259 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 TDGQ13569 410 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 GIPC2Q8TF65 315 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 STK32AQ8WU08 396 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 FBXO32Q969P5 355 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 HSFY1Q96LI6 401 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 MYADMQ96S97 322 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 NUP58Q9BVL2 599 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 STK33Q9BYT3 514 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 TLR8Q9NR97 1041 aaKnown RBP11.32□□□□□ -0.6
UBR4-208ENST00000459947 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
UBR4-208ENST00000459947 HMGA1P17096 107 aaKnown RBP11.31□□□□□ -0.6
UBR4-208ENST00000459947 ADORA2BP29275 332 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 GOLGA8FQ08AF8 430 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 GOLGA8DPQ0D2H9 430 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 HTR4Q13639 388 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 KLHDC7AQ5VTJ3 777 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 RNF135Q8IUD6 432 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 YAF2Q8IY57 180 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 KCTD13Q8WZ19 329 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 DNASE1L2Q92874 299 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 LPIN3Q9BQK8 851 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 NUCKS1Q9H1E3 243 aaKnown RBP11.31□□□□□ -0.6
UBR4-208ENST00000459947 PATJQ8NI35 1801 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 FAM92AA1XBS5 289 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 F11P03951 625 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 ZNF445P59923 1031 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 UBXN1Q04323 297 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 GOLGA7BQ2TAP0 167 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 GPR158Q5T848 1215 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 SNX30Q5VWJ9 437 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 ARHGEF19Q8IW93 802 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 IRGQQ8WZA9 623 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 C1QTNF1Q9BXJ1 281 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 VPS16Q9H269 839 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 SLITRK6Q9H5Y7 841 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 LRRC4Q9HBW1 653 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 FAM49BQ9NUQ9 324 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 SCML2Q9UQR0 700 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 NUP210Q8TEM1 1887 aaPredicted RBP11.31□□□□□ -0.6
UBR4-208ENST00000459947 RALAP11233 206 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 CEBPBP17676 345 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 IQCB1Q15051 598 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 DDR2Q16832 855 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 DHX40Q8IX18 779 aaKnown RBP11.31□□□□□ -0.6
UBR4-208ENST00000459947 CELF5Q8N6W0 485 aaKnown RBP11.31□□□□□ -0.6
UBR4-208ENST00000459947 GOLGA1Q92805 767 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 IL21Q9HBE4 155 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 CBX8Q9HC52 389 aa11.31□□□□□ -0.6
UBR4-208ENST00000459947 OLA1Q9NTK5 396 aaKnown RBP11.31□□□□□ -0.6
UBR4-208ENST00000459947 O00370 1275 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 SERPINC1P01008 464 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 CCDC130P13994 396 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 AVPR1AP37288 418 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 MLLT6P55198 1093 aaPredicted RBP11.3□□□□□ -0.6
UBR4-208ENST00000459947 ARHGAP29Q52LW3 1261 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 PHLDB3Q6NSJ2 640 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 TRIM72Q6ZMU5 477 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 TTC9BQ8N6N2 239 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 SPAG5Q96R06 1193 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 CRACR2AQ9BSW2 395 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 MAGED2Q9UNF1 606 aaPredicted RBP11.3□□□□□ -0.6
UBR4-208ENST00000459947 NME7Q9Y5B8 376 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 SLC9A3R1O14745 358 aaPredicted RBP11.3□□□□□ -0.6
UBR4-208ENST00000459947 SLC9A1P19634 815 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 STAT1P42224 750 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 TEAD2Q15562 447 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 SCARA3Q6AZY7 606 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 CLEC20AQ6ZU45 233 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 CCDC186Q7Z3E2 898 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 SHDQ96IW2 340 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 KREMEN1Q96MU8 473 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 TWNKQ96RR1 684 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 TRPV5Q9NQA5 729 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 SLC2A4RGQ9NR83 387 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 HCFC1R1Q9NWW0 138 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
UBR4-208ENST00000459947 GNA15P30679 374 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 PLA2G4AP47712 749 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 NTHL1P78549 312 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 RRAGAQ7L523 313 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 ITFG1Q8TB96 612 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 SMOQ99835 787 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 ZNF334Q9HCZ1 680 aaPredicted RBP11.3□□□□□ -0.6
UBR4-208ENST00000459947 CLIC5Q9NZA1 410 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 HMGXB4Q9UGU5 601 aa11.3□□□□□ -0.6
UBR4-208ENST00000459947 TSPAN16Q9UKR8 245 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms