RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 CSNK2BP67870 215 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 TTLL9Q3SXZ7 439 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 SYDE1Q6ZW31 735 aaPredicted RBP14.27□□□□□ -0.12
LRCH3-206ENST00000438796 TUBGCP3Q96CW5 907 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 NSMCE4AQ9NXX6 385 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 IGSF9BQ9UPX0 1349 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 UBTFL6P0CB48 400 aaPredicted RBP14.27□□□□□ -0.12
LRCH3-206ENST00000438796 FMR1Q06787 632 aaKnown RBP eCLIP14.27□□□□□ -0.128e-8■■■■■ 27.8
LRCH3-206ENST00000438796 MMGT1Q8N4V1 131 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 ELMO3Q96BJ8 720 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 BPIFA3Q9BQP9 254 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 CDK12Q9NYV4 1490 aaPredicted RBP14.27□□□□□ -0.12
LRCH3-206ENST00000438796 CASP4P49662 377 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 TRIM9Q9C026 710 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 CAAP1Q9H8G2 361 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 NT5MQ9NPB1 228 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 MKL2Q9ULH7 1088 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 PCDHB12Q9Y5F1 795 aa14.27□□□□□ -0.12
LRCH3-206ENST00000438796 CNTNAP2Q9UHC6 1331 aa14.27□□□□□ -0.13
LRCH3-206ENST00000438796 EIF2B5Q13144 721 aaKnown RBP14.27□□□□□ -0.13
LRCH3-206ENST00000438796 TRMT11Q7Z4G4 463 aaKnown RBP14.27□□□□□ -0.13
LRCH3-206ENST00000438796 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.27□□□□□ -0.13
LRCH3-206ENST00000438796 UXS1Q8NBZ7 420 aa14.27□□□□□ -0.13
LRCH3-206ENST00000438796 OLFM3Q96PB7 478 aa14.27□□□□□ -0.13
LRCH3-206ENST00000438796 SH3BGRLO75368 114 aa14.27□□□□□ -0.13
LRCH3-206ENST00000438796 DEAF1O75398 565 aaPredicted RBP14.27□□□□□ -0.13
LRCH3-206ENST00000438796 C16orf96A6NNT2 1141 aa14.27□□□□□ -0.13
LRCH3-206ENST00000438796 RGL2O15211 777 aa14.27□□□□□ -0.13
LRCH3-206ENST00000438796 MAGEA9P43362 315 aa14.27□□□□□ -0.13
LRCH3-206ENST00000438796 SLC18A3Q16572 532 aa14.27□□□□□ -0.13
LRCH3-206ENST00000438796 FAM83EQ2M2I3 478 aa14.27□□□□□ -0.13
LRCH3-206ENST00000438796 METTL16Q86W50 562 aaKnown RBP14.27□□□□□ -0.13
LRCH3-206ENST00000438796 WDR24Q96S15 920 aa14.27□□□□□ -0.13
LRCH3-206ENST00000438796 KATNA1O75449 491 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 HALP42357 657 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 OXCT1P55809 520 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 CACHD1Q5VU97 1274 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 FOXR1Q6PIV2 292 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 GRAMD1AQ96CP6 724 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 POP1Q99575 1024 aaKnown RBP14.26□□□□□ -0.13
LRCH3-206ENST00000438796 MGAT4DA6NG13 374 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 NACC2Q96BF6 587 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 ISCA1Q9BUE6 129 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 ARHGEF3Q9NR81 526 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 ZNF682O95780 498 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 RHOCP08134 193 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 TAL1P17542 331 aaPredicted RBP14.26□□□□□ -0.13
LRCH3-206ENST00000438796 FLT3P36888 993 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 NOL9Q5SY16 702 aaKnown RBP14.26□□□□□ -0.13
LRCH3-206ENST00000438796 MTSS1LQ765P7 747 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 RSAD1Q9HA92 442 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 KRT16P08779 473 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 C16orf72Q14CZ0 275 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 PDIA6Q15084 440 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 NAPEPLDQ6IQ20 393 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 PLEKHH3Q7Z736 793 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 FAR2Q96K12 515 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 TMEM39AQ9NV64 488 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 NCAPD2Q15021 1401 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 KIAA0391O15091 583 aaKnown RBP14.26□□□□□ -0.13
LRCH3-206ENST00000438796 OVGP1Q12889 678 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 C16orf86Q6ZW13 317 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 MTFMTQ96DP5 389 aaKnown RBP14.26□□□□□ -0.13
LRCH3-206ENST00000438796 CRAMP1Q96RY5 1269 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 NIF3L1Q9GZT8 377 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 TBX20Q9UMR3 447 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 ARL2BPQ9Y2Y0 163 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 USP1O94782 785 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 PDIA5Q14554 519 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 RGL4Q8IZJ4 473 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 MANSC1Q9H8J5 431 aa14.26□□□□□ -0.13
LRCH3-206ENST00000438796 SNRPAP09012 282 aaKnown RBP14.25□□□□□ -0.13
LRCH3-206ENST00000438796 SERPINB3P29508 390 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 CRB1P82279 1406 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 TFAP2DQ7Z6R9 452 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 UNC45BQ8IWX7 931 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 UVRAGQ9P2Y5 699 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 LNPEPQ9UIQ6 1025 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 LAMC1P11047 1609 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 TBC1D12O60347 775 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 ACOX1Q15067 660 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 CHST13Q8NET6 341 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 OPTNQ96CV9 577 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 EXO5Q9H790 373 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 PARVBQ9HBI1 364 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 SMPD4Q9NXE4 827 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 TUBE1Q9UJT0 475 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 B2RBV5 119 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 M0R3G1 203 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 RRM2P31350 389 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 C16orf59Q7L2K0 433 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 PTAR1Q7Z6K3 402 aaPredicted RBP14.25□□□□□ -0.13
LRCH3-206ENST00000438796 HERC6Q8IVU3 1022 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 DISP1Q96F81 1524 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 PLA2G6O60733 806 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 SGPL1O95470 568 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 ITIH2P19823 946 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 RHOAP61586 193 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 DPYDQ12882 1025 aa14.25□□□□□ -0.13
LRCH3-206ENST00000438796 SGCGQ13326 291 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms