RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ATXN3LQ9H3M9 355 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 STARD7Q9NQZ5 370 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 IARS2Q9NSE4 1012 aaKnown RBP19.13■□□□□ 0.65
SHANK3-202ENST00000414786 SLC38A7Q9NVC3 462 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 AKAP7Q9P0M2 348 aaPredicted RBP19.13■□□□□ 0.65
SHANK3-202ENST00000414786 NR5A2O00482 541 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 CD2BP2O95400 341 aaKnown RBP19.13■□□□□ 0.65
SHANK3-202ENST00000414786 PTGER2P43116 358 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 TRADDQ15628 312 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 PCDHB12Q9Y5F1 795 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 RPN2P04844 631 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 POLBP06746 335 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 HNRNPH2P55795 449 aaKnown RBP19.13■□□□□ 0.65
SHANK3-202ENST00000414786 USP7Q93009 1102 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 CYLDQ9NQC7 956 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 DPP3Q9NY33 737 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 UGGT2Q9NYU1 1516 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 RGS12O14924 1447 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 EPHB3P54753 998 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 OVGP1Q12889 678 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 RBM23Q86U06 439 aaKnown RBP19.13■□□□□ 0.65
SHANK3-202ENST00000414786 RSPH1Q8WYR4 309 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 IL17RAQ96F46 866 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 PHACTR1Q9C0D0 580 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 PSMD3O43242 534 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 STAG3L1P0CL83 205 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 LBPP18428 481 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 RHOAP61586 193 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 SFSWAPQ12872 951 aaKnown RBP19.13■□□□□ 0.65
SHANK3-202ENST00000414786 TRAF2Q12933 501 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 RCOR2Q8IZ40 523 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 NT5MQ9NPB1 228 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 C16orf96A6NNT2 1141 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 ALBP02768 609 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 DYNC1I2Q13409 638 aaKnown RBP19.13■□□□□ 0.65
SHANK3-202ENST00000414786 DCP1AQ9NPI6 582 aaPredicted RBP19.13■□□□□ 0.65
SHANK3-202ENST00000414786 CPDO75976 1380 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 TRIP10Q15642 601 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 SNRNP35Q16560 246 aaKnown RBP19.12■□□□□ 0.65
SHANK3-202ENST00000414786 ARMC4Q5T2S8 1044 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 CACHD1Q5VU97 1274 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 NOTUMQ6P988 496 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 GPD1P21695 349 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 PCSK1P29120 753 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 CDC27P30260 824 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 STX4Q12846 297 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 ZNF618Q5T7W0 954 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 SYTL5Q8TDW5 730 aaPredicted RBP19.12■□□□□ 0.65
SHANK3-202ENST00000414786 RNFT2Q96EX2 444 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 LGALS16A8MUM7 142 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 HSPA9P38646 679 aaKnown RBP19.12■□□□□ 0.65
SHANK3-202ENST00000414786 PRKAG1P54619 331 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 FAAH2Q6GMR7 532 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 RBM15Q96T37 977 aaKnown RBP eCLIP19.12■□□□□ 0.653e-7■■■■□ 25
SHANK3-202ENST00000414786 SH3GLB2Q9NR46 395 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 TIGD7Q6NT04 549 aaPredicted RBP19.12■□□□□ 0.65
SHANK3-202ENST00000414786 SH2D3CQ8N5H7 860 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 TFB1MQ8WVM0 346 aaKnown RBP19.12■□□□□ 0.65
SHANK3-202ENST00000414786 RAD21L1Q9H4I0 556 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 COL15A1P39059 1388 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 GRIN3BO60391 1043 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 SCGNO76038 276 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 C16orf89Q6UX73 402 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 SLC13A5Q86YT5 568 aaPredicted RBP19.12■□□□□ 0.65
SHANK3-202ENST00000414786 NEK7Q8TDX7 302 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 SEPT1Q8WYJ6 367 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 TLR8Q9NR97 1041 aaKnown RBP19.12■□□□□ 0.65
SHANK3-202ENST00000414786 RIC8BQ9NVN3 520 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 ZMYM5Q9UJ78 669 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 MSH3P20585 1137 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 GARTP22102 1010 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 GRK4P32298 578 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 KCNJ1P48048 391 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 KCNT1Q5JUK3 1230 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 GOLPH3Q9H4A6 298 aa19.12■□□□□ 0.65
SHANK3-202ENST00000414786 ZNF608Q9ULD9 1512 aaPredicted RBP19.11■□□□□ 0.65
SHANK3-202ENST00000414786 AP3B1O00203 1094 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 RBMXL2O75526 392 aaKnown RBP19.11■□□□□ 0.65
SHANK3-202ENST00000414786 SOAT2O75908 522 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 MAPK10P53779 464 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 SCRN3Q0VDG4 424 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 FBXO38Q6PIJ6 1188 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 FBXO16Q8IX29 292 aaPredicted RBP19.11■□□□□ 0.65
SHANK3-202ENST00000414786 PARP9Q8IXQ6 854 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 ATP5HO75947 161 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 AMD1P17707 334 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 CEP68Q76N32 757 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 RHOCP08134 193 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 CHN1P15882 459 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 CYP2C19P33261 490 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 OXCT1P55809 520 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 PALB2Q86YC2 1186 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 AXIN2Q9Y2T1 843 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 PLA2G6O60733 806 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 TGM2P21980 687 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 EFL1Q7Z2Z2 1120 aaKnown RBP19.11■□□□□ 0.65
SHANK3-202ENST00000414786 TAF1DQ9H5J8 278 aaPredicted RBP19.11■□□□□ 0.65
SHANK3-202ENST00000414786 CYP2F1P24903 491 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 TEX13BQ9BXU2 312 aa19.11■□□□□ 0.65
SHANK3-202ENST00000414786 PRRG4Q9BZD6 226 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms