RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 NRLP54845 237 aa16.64■□□□□ 0.25
HOXD3-202ENST00000410016 ACAP1Q15027 740 aa16.64■□□□□ 0.25
HOXD3-202ENST00000410016 FBXO36Q8NEA4 188 aa16.64■□□□□ 0.25
HOXD3-202ENST00000410016 NFKBIZQ9BYH8 718 aa16.64■□□□□ 0.25
HOXD3-202ENST00000410016 ASCC2Q9H1I8 757 aaPredicted RBP16.64■□□□□ 0.25
HOXD3-202ENST00000410016 SYNCQ9H7C4 482 aa16.64■□□□□ 0.25
HOXD3-202ENST00000410016 VRTNQ9H8Y1 702 aa16.64■□□□□ 0.25
HOXD3-202ENST00000410016 TXNRD2Q9NNW7 524 aa16.64■□□□□ 0.25
HOXD3-202ENST00000410016 MCM8Q9UJA3 840 aa16.64■□□□□ 0.25
HOXD3-202ENST00000410016 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.64■□□□□ 0.25
HOXD3-202ENST00000410016 CHKBQ9Y259 395 aa16.64■□□□□ 0.25
HOXD3-202ENST00000410016 MGAMO43451 1857 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 ANK1P16157 1881 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 DNAJC25-GNG10A0A024R161 153 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 SLC26A2P50443 739 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 JADE1Q6IE81 842 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 GADL1Q6ZQY3 521 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 CYP4V2Q6ZWL3 525 aaPredicted RBP16.63■□□□□ 0.25
HOXD3-202ENST00000410016 FBF1Q8TES7 1133 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 THOC1Q96FV9 657 aaKnown RBP16.63■□□□□ 0.25
HOXD3-202ENST00000410016 PEBP4Q96S96 227 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 NCAPGQ9BPX3 1015 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 RNPEPQ9H4A4 650 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 CYLDQ9NQC7 956 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 LRRC37A2A6NM11 1700 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 A0A0G2JLL6 359 aaPredicted RBP16.63■□□□□ 0.25
HOXD3-202ENST00000410016 HBP1O60381 514 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 CSDE1O75534 798 aaKnown RBP16.63■□□□□ 0.25
HOXD3-202ENST00000410016 STAG3L1P0CL83 205 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 PHBP35232 272 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 MAP2K2P36507 400 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 EIF3EP60228 445 aaKnown RBP16.63■□□□□ 0.25
HOXD3-202ENST00000410016 MTM1Q13496 603 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 DPYSL3Q14195 570 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 AMHR2Q16671 573 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 Q3C1V9 767 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 SH3PXD2AQ5TCZ1 1133 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 LVRNQ6Q4G3 990 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 PRRT2Q7Z6L0 340 aaPredicted RBP16.63■□□□□ 0.25
HOXD3-202ENST00000410016 HOMEZQ8IX15 550 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 TAB3Q8N5C8 712 aaPredicted RBP16.63■□□□□ 0.25
HOXD3-202ENST00000410016 TBC1D31Q96DN5 1066 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 PAFAH2Q99487 392 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 MYLK2Q9H1R3 596 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 SMARCAD1Q9H4L7 1026 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.63■□□□□ 0.25
HOXD3-202ENST00000410016 USH1CQ9Y6N9 552 aa16.63■□□□□ 0.25
HOXD3-202ENST00000410016 HMGCRP04035 888 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 RBP3P10745 1247 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 PCK1P35558 622 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 TMEM132AQ24JP5 1023 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 MAP1SQ66K74 1059 aaPredicted RBP16.62■□□□□ 0.25
HOXD3-202ENST00000410016 TRNP1Q6NT89 227 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 RFX6Q8HWS3 928 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 IGDCC3Q8IVU1 814 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 FBXO16Q8IX29 292 aaPredicted RBP16.62■□□□□ 0.25
HOXD3-202ENST00000410016 SPATA18Q8TC71 538 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 LRRC8CQ8TDW0 803 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 AGAP11Q8TF27 550 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 DCAKDQ8WVC6 231 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 HSPH1Q92598 858 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 ZNF75CPQ92670 426 aaPredicted RBP16.62■□□□□ 0.25
HOXD3-202ENST00000410016 XPO7Q9UIA9 1087 aaKnown RBP16.62■□□□□ 0.25
HOXD3-202ENST00000410016 SMAPO00193 183 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 RNF8O76064 485 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 ZWINTO95229 277 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 C22orf31O95567 290 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 MSH2P43246 934 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 ZNF143P52747 638 aaPredicted RBP16.62■□□□□ 0.25
HOXD3-202ENST00000410016 MMRN1Q13201 1228 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 FAM187BQ17R55 369 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 RAB6CQ53S08 254 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 GPC2Q8N158 579 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 PDIK1LQ8N165 341 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 TACO1Q9BSH4 297 aaKnown RBP16.62■□□□□ 0.25
HOXD3-202ENST00000410016 CALN1Q9BXU9 219 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 RAB6CQ9H0N0 254 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 RSAD1Q9HA92 442 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 CYP3A43Q9HB55 503 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 RBPJLQ9UBG7 517 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 L3MBTL1Q9Y468 752 aa16.62■□□□□ 0.25
HOXD3-202ENST00000410016 POLR2AP24928 1970 aaKnown RBP16.61■□□□□ 0.25
HOXD3-202ENST00000410016 A0A1B0GUA9 196 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 A8MUI8 341 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 M0QYV0 167 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 SLC25A27O95847 323 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 EZRP15311 586 aaKnown RBP16.61■□□□□ 0.25
HOXD3-202ENST00000410016 ATICP31939 592 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 KLHL38Q2WGJ6 581 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 SLC10A6Q3KNW5 377 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 HHATQ5VTY9 493 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 OTOAQ7RTW8 1153 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 PALM2Q8IXS6 379 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 C10orf82Q8WW14 230 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 UTP4Q969X6 686 aaKnown RBP16.61■□□□□ 0.25
HOXD3-202ENST00000410016 ERP27Q96DN0 273 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 LRRC37BQ96QE4 947 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 EBF2Q9HAK2 575 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 PRMT7Q9NVM4 692 aaPredicted RBP16.61■□□□□ 0.25
HOXD3-202ENST00000410016 ASNSD1Q9NWL6 643 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms