RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 EIF3EP60228 445 aaKnown RBP17.64■□□□□ 0.41
NUP50-203ENST00000407019 PKN2Q16513 984 aaKnown RBP17.64■□□□□ 0.41
NUP50-203ENST00000407019 MAP1SQ66K74 1059 aaPredicted RBP17.64■□□□□ 0.41
NUP50-203ENST00000407019 CYB5D1Q6P9G0 228 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 TTC39CQ8N584 583 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 AFG1LQ8WV93 481 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 NLRP7Q8WX94 980 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 ACAP3Q96P50 834 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 SMC6Q96SB8 1091 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 PLCD4Q9BRC7 762 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 MIS12Q9H081 205 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 DPP3Q9NY33 737 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 PSMC3IPQ9P2W1 217 aaPredicted RBP17.64■□□□□ 0.41
NUP50-203ENST00000407019 SMG5Q9UPR3 1016 aaKnown RBP17.64■□□□□ 0.41
NUP50-203ENST00000407019 SMAPO00193 183 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 TSPAN1O60635 241 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 SPAG7O75391 227 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 SLC18A1P54219 525 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 WDR4P57081 412 aaKnown RBP17.63■□□□□ 0.41
NUP50-203ENST00000407019 GPX6P59796 221 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 ZNF792Q3KQV3 632 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 FAM133BQ5BKY9 247 aaKnown RBP17.63■□□□□ 0.41
NUP50-203ENST00000407019 EFHC2Q5JST6 749 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 MTHFD1LQ6UB35 978 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 MAMDC4Q6UXC1 1216 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 UNC45BQ8IWX7 931 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 ATP11CQ8NB49 1132 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 PYROXD1Q8WU10 500 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 CNPY3Q9BT09 278 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 FAM124BQ9H5Z6 455 aaPredicted RBP17.63■□□□□ 0.41
NUP50-203ENST00000407019 PNMA3Q9UL41 463 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 KIAA1257Q9ULG3 409 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 CLUHO75153 1309 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 CYP2C8P10632 490 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 TAC1P20366 129 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 GAD2Q05329 585 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 SNAPC2Q13487 334 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 OR6B2Q6IFH4 312 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 LCLAT1Q6UWP7 414 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 NT5DC4Q86YG4 428 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 GTF3C2Q8WUA4 911 aaPredicted RBP17.63■□□□□ 0.41
NUP50-203ENST00000407019 GRAMD1AQ96CP6 724 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 PEBP4Q96S96 227 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 PAIP2Q9BPZ3 127 aaKnown RBP17.63■□□□□ 0.41
NUP50-203ENST00000407019 TSPAN16Q9UKR8 245 aa17.63■□□□□ 0.41
NUP50-203ENST00000407019 C2CD4BA6NLJ0 364 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 E7ESA3 106 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 ASMTLO95671 621 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 RBP3P10745 1247 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 CYP3A5P20815 502 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 FOXN2P32314 431 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 GJA5P36382 358 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 MNAT1P51948 309 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 GEMIN4P57678 1058 aaKnown RBP17.62■□□□□ 0.41
NUP50-203ENST00000407019 CCNA1P78396 465 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 MTFR1Q15390 333 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 FNBP1LQ5T0N5 605 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 FAM183BPQ6ZVS7 135 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 GBP7Q8N8V2 638 aaPredicted RBP17.62■□□□□ 0.41
NUP50-203ENST00000407019 FAM71DQ8N9W8 422 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 GPRC5AQ8NFJ5 357 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 EMID1Q96A84 441 aaPredicted RBP17.62■□□□□ 0.41
NUP50-203ENST00000407019 NT5C1AQ9BXI3 368 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 MAK16Q9BXY0 300 aaKnown RBP17.62■□□□□ 0.41
NUP50-203ENST00000407019 PRKAG3Q9UGI9 489 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 FETUBQ9UGM5 382 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 RBM47A0AV96 593 aaKnown RBP17.62■□□□□ 0.41
NUP50-203ENST00000407019 E5RJQ4 531 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 UBOX5O94941 541 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 ADORA2AP29274 412 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 CDH6P55285 790 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 ROR1Q01973 937 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 SPARCL1Q14515 664 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 MSS51Q4VC12 460 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 CGB2Q6NT52 195 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 SPATA18Q8TC71 538 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 DENND1AQ8TEH3 1009 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 RXFP2Q8WXD0 754 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 MRRFQ96E11 262 aaKnown RBP17.62■□□□□ 0.41
NUP50-203ENST00000407019 KIF12Q96FN5 646 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 C16orf70Q9BSU1 422 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 KIF9Q9HAQ2 790 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.62■□□□□ 0.41
NUP50-203ENST00000407019 RABGEF1Q9UJ41 708 aa17.62■□□□□ 0.41
NUP50-203ENST00000407019 ZMYND8Q9ULU4 1186 aaPredicted RBP17.62■□□□□ 0.41
NUP50-203ENST00000407019 A0A1B0GUA9 196 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 TMEM63AO94886 807 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 ENDOD1O94919 500 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 PDGFRAP16234 1089 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 ADCYAP1R1P41586 468 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 MMRN1Q13201 1228 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 TFDP2Q14188 446 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 NOMO1Q15155 1222 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 STILQ15468 1287 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 GOLGA7BQ2TAP0 167 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 KLHL38Q2WGJ6 581 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 SH3PXD2AQ5TCZ1 1133 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 TRNP1Q6NT89 227 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 PARP9Q8IXQ6 854 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 C4orf33Q8N1A6 199 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms