RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 PKN2Q16513 984 aaKnown RBP18.38■□□□□ 0.53
SNED1-204ENST00000401884 ATP13A4Q4VNC1 1196 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 MTDHQ86UE4 582 aaKnown RBP18.38■□□□□ 0.53
SNED1-204ENST00000401884 CNPY4Q8N129 248 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 M0QYT0 321 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 APOEP02649 317 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 EPHB2P29323 1055 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 ELK3P41970 407 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 ZACNQ401N2 412 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 CPB2Q96IY4 423 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 LRRC19Q9H756 370 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 RRN3P2A6NIE6 340 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 ACKR2O00590 384 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 NUDT17P0C025 328 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 NCAM1P13591 858 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 INSRRP14616 1297 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 EFTUD2Q15029 972 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNED1-204ENST00000401884 HABP4Q5JVS0 413 aaKnown RBP18.37■□□□□ 0.53
SNED1-204ENST00000401884 ZNF526Q8TF50 670 aaPredicted RBP18.37■□□□□ 0.53
SNED1-204ENST00000401884 AFG1LQ8WV93 481 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 PYGBP11216 843 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 EIF4BP23588 611 aaKnown RBP18.37■□□□□ 0.53
SNED1-204ENST00000401884 MMP14P50281 582 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 PTPRN2Q92932 1015 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 VPS33BQ9H267 617 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 FZD1Q9UP38 647 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 SPEF2Q9C093 1822 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 IGKV6D-41A0A0C4DH26 115 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 RASSF10A6NK89 507 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 BNIP3LO60238 219 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 MYL2P10916 166 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 MAMLD1Q13495 774 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 ZNF268Q14587 947 aaPredicted RBP18.37■□□□□ 0.53
SNED1-204ENST00000401884 ICA1LQ8NDH6 482 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 AP3B1O00203 1094 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 FSBPO95073 299 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 TSTA3Q13630 321 aaPredicted RBP18.37■□□□□ 0.53
SNED1-204ENST00000401884 UGCGQ16739 394 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 PALB2Q86YC2 1186 aa18.37■□□□□ 0.53
SNED1-204ENST00000401884 FAM200BP0CF97 657 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 ALDH5A1P51649 535 aaPredicted RBP18.36■□□□□ 0.53
SNED1-204ENST00000401884 IL1RL1Q01638 556 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 FUKQ8N0W3 1084 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 KREMEN1Q96MU8 473 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 TRPV6Q9H1D0 765 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 DDIT4Q9NX09 232 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 POLIQ9UNA4 740 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 GLRA2P23416 452 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 DAB2IPQ5VWQ8 1189 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 DENND5BQ6ZUT9 1274 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 TCP10LQ8TDR4 215 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 CMTM5Q96DZ9 223 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 SHCBP1LQ9BZQ2 653 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 SAE1Q9UBE0 346 aaPredicted RBP18.36■□□□□ 0.53
SNED1-204ENST00000401884 TSPAN16Q9UKR8 245 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 UBA6A0AVT1 1052 aaPredicted RBP18.36■□□□□ 0.53
SNED1-204ENST00000401884 ENO3P13929 434 aaPredicted RBP18.36■□□□□ 0.53
SNED1-204ENST00000401884 EEF1B2P24534 225 aaKnown RBP18.36■□□□□ 0.53
SNED1-204ENST00000401884 PCSK1P29120 753 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 PNPLA4P41247 253 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 NDST1P52848 882 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 NFIL3Q16649 462 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 ASAP3Q8TDY4 903 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 PCDHB18PQ96TA0 734 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 DRC3Q9H069 523 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 ERVK-5Q9HDB9 667 aa18.36■□□□□ 0.53
SNED1-204ENST00000401884 LOC102724159A0A0B4J2E5 919 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 SRRM3A6NNA2 597 aaPredicted RBP18.35■□□□□ 0.53
SNED1-204ENST00000401884 AGPSO00116 658 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 AIM2O14862 343 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 FSCN2O14926 492 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 PTPRAP18433 802 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 MIPP30301 263 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 PWP2Q15269 919 aaKnown RBP18.35■□□□□ 0.53
SNED1-204ENST00000401884 RASGEF1CQ8N431 466 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 ZCCHC9Q8N567 271 aaKnown RBP18.35■□□□□ 0.53
SNED1-204ENST00000401884 ATPAF2Q8N5M1 289 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 LRRC57Q8N9N7 239 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 CENPTQ96BT3 561 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 MRPL40Q9NQ50 206 aaKnown RBP18.35■□□□□ 0.53
SNED1-204ENST00000401884 SLC39A10Q9ULF5 831 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 CCL15-CCL14A0A0B4J2E2 113 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 H3BRB1 525 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 TNPO2O14787 897 aaKnown RBP18.35■□□□□ 0.53
SNED1-204ENST00000401884 SNX3O60493 162 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 ATICP31939 592 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 NSUN2Q08J23 767 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNED1-204ENST00000401884 BMPR2Q13873 1038 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 CNGA2Q16280 664 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 CCL15Q16663 113 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 DCAF4L1Q3SXM0 396 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 YTHDF3Q7Z739 585 aaKnown RBP18.35■□□□□ 0.53
SNED1-204ENST00000401884 C12orf56Q8IXR9 622 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 SEMA4DQ92854 862 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 KCNK16Q96T55 309 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 SH3GL2Q99962 352 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 TUT1Q9H6E5 874 aaKnown RBP18.35■□□□□ 0.53
SNED1-204ENST00000401884 C10orf88Q9H8K7 445 aa18.35■□□□□ 0.53
SNED1-204ENST00000401884 BARX2Q9UMQ3 279 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms