RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 VNN1O95497 513 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 ABL1P00519 1130 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 LMNAP02545 664 aaKnown RBP14.62□□□□□ -0.07
CXCL12-205ENST00000395794 PFKLP17858 780 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 RAP1GAPP47736 663 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 CCR3P51677 355 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 TNK2Q07912 1038 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 MTAPQ13126 283 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 FZD5Q13467 585 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 RUNX3Q13761 415 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 EDRF1Q3B7T1 1238 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 DGKKQ5KSL6 1271 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 MAML2Q8IZL2 1156 aaPredicted RBP14.62□□□□□ -0.07
CXCL12-205ENST00000395794 SMARCE1Q969G3 411 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 SLITRK1Q96PX8 696 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 CYP2S1Q96SQ9 504 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 B3GNT5Q9BYG0 378 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 ZNF518BQ9C0D4 1074 aa14.62□□□□□ -0.07
CXCL12-205ENST00000395794 COL4A3Q01955 1670 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 CLDN5O00501 218 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 TADA3O75528 432 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 RTN3O95197 1032 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-205ENST00000395794 ASS1P00966 412 aaKnown RBP14.61□□□□□ -0.07
CXCL12-205ENST00000395794 HLA-DRAP01903 254 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 TRIM49P0CI25 452 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 TRIM49CP0CI26 452 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 EPB41P11171 864 aaKnown RBP14.61□□□□□ -0.07
CXCL12-205ENST00000395794 CHRNB1P11230 501 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 GTF2H1P32780 548 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 GCLMP48507 274 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 IFNAR2P48551 515 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 NRLP54845 237 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 IFRD2Q12894 506 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-205ENST00000395794 MTF1Q14872 753 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 ZNF658Q5TYW1 1059 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-205ENST00000395794 ACOT1Q86TX2 421 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 UNC93AQ86WB7 457 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 SMYD4Q8IYR2 804 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-205ENST00000395794 NUP93Q8N1F7 819 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 ZNF687Q8N1G0 1237 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 ARL14EPQ8N8R7 260 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-205ENST00000395794 SMARCD1Q96GM5 515 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 TIGD1Q96MW7 591 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 FAM83CQ9BQN1 747 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 TTLL2Q9BWV7 592 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 FAM126AQ9BYI3 521 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-205ENST00000395794 EBF3Q9H4W6 596 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 MMRN2Q9H8L6 949 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 ZSCAN32Q9NX65 697 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 DUS2Q9NX74 493 aaKnown RBP14.61□□□□□ -0.07
CXCL12-205ENST00000395794 NME7Q9Y5B8 376 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 PCDHGA2Q9Y5H1 932 aa14.61□□□□□ -0.07
CXCL12-205ENST00000395794 C2orf78A6NCI8 922 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 YWHAQP27348 245 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 CXCL12P48061 93 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 USP46P62068 366 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 GRSF1Q12849 480 aaKnown RBP eCLIP14.6□□□□□ -0.07
CXCL12-205ENST00000395794 TAF10Q12962 218 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 NR1H3Q13133 447 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 STIM1Q13586 685 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 PON2Q15165 354 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 MAMSTRQ6ZN01 415 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 ADSSL1Q8N142 457 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 SYNPOQ8N3V7 929 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 CPA6Q8N4T0 437 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 PDZD8Q8NEN9 1154 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 SH3RF2Q8TEC5 729 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 ATP2A3Q93084 1043 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 ELMO3Q96BJ8 720 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 HINFPQ9BQA5 517 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 CYP3A43Q9HB55 503 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 TMEM8AQ9HCN3 771 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 DMAP1Q9NPF5 467 aaPredicted RBP14.6□□□□□ -0.07
CXCL12-205ENST00000395794 CACNA1HO95180 2353 aa14.6□□□□□ -0.07
CXCL12-205ENST00000395794 ZFHX2Q9C0A1 2572 aaPredicted RBP14.59□□□□□ -0.07
CXCL12-205ENST00000395794 MIA3Q5JRA6 1907 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 ZNF840PA6NDX5 716 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 AP1G2O75843 785 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 PRCPP42785 496 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 NDST1P52848 882 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 PPP3CAQ08209 521 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 ZCWPW2Q504Y3 356 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 C1orf220Q5T0J3 134 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 KRT39Q6A163 491 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 TRIM68Q6AZZ1 485 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 SPOPLQ6IQ16 392 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 TXNDC11Q6PKC3 985 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 TSSK4Q6SA08 328 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 FAM35AQ86V20 835 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 SPEM1Q8N4L4 309 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 ENGASEQ8NFI3 743 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 TAS1R2Q8TE23 839 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 OSCP1Q8WVF1 389 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 FBXO32Q969P5 355 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 SLC22A12Q96S37 553 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 NIF3L1Q9GZT8 377 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 SDCBP2Q9H190 292 aa14.59□□□□□ -0.07
CXCL12-205ENST00000395794 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.59□□□□□ -0.07
CXCL12-205ENST00000395794 PRMT8Q9NR22 394 aaPredicted RBP14.59□□□□□ -0.07
CXCL12-205ENST00000395794 GCNT4Q9P109 453 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms