RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 SERPIND1P05546 499 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 SSTR3P32745 418 aaPredicted RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 TBX4P57082 545 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 RHBDL3P58872 404 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 MCL1Q07820 350 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 KCNA1Q09470 495 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 USP10Q14694 798 aaKnown RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 NUGGCQ68CJ6 796 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 PI4K2AQ9BTU6 479 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 RAD18Q9NS91 495 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 PPARGC1AQ9UBK2 798 aaKnown RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 TEKT2Q9UIF3 430 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 CDY2AQ9Y6F7 541 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 TKTL1P51854 596 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 HABP4Q5JVS0 413 aaKnown RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 UNC93AQ86WB7 457 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 PPP1R16AQ96I34 528 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 IL17RBQ9NRM6 502 aa10.24□□□□□ -0.77
SCAF11-202ENST00000369367 XPO7Q9UIA9 1087 aaKnown RBP10.24□□□□□ -0.77
SCAF11-202ENST00000369367 C5orf58C9J3I9 102 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CXCL8P10145 99 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CYP2C18P33260 490 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 NR1I3Q14994 352 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 BTNL9Q6UXG8 535 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 ZNF438Q7Z4V0 828 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 PATL1Q86TB9 770 aaKnown RBP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 GAS2L3Q86XJ1 694 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 KLHL29Q96CT2 875 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CFLARO15519 480 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CTDNEP1O95476 244 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CASP8Q14790 479 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 USP41Q3LFD5 358 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 TMCO4Q5TGY1 634 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 RSPH1Q8WYR4 309 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 PORCNQ9H237 461 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 ASAH2Q9NR71 780 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 C20orf96Q9NUD7 363 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 RIC8BQ9NVN3 520 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 TRMT6Q9UJA5 497 aaKnown RBP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 SLC39A10Q9ULF5 831 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CNTNAP2Q9UHC6 1331 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 E2F6O75461 281 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 TP53BP2Q13625 1128 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 PDCD2Q16342 344 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 ZSCAN26Q16670 478 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 NOMO2Q5JPE7 1267 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 DEFB118Q96PH6 123 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 SLC28A3Q9HAS3 691 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 GIT1Q9Y2X7 761 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 COL3A1P02461 1466 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 TRAV19A0A0A6YYK7 116 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CSH1P0DML2 217 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CSH2P0DML3 217 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 SMIM10L2AP0DMW4 78 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 SMIM10L2BP0DMW5 78 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 LAG3P18627 525 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 NCKAP1LP55160 1127 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 MAP3K7CLP57077 242 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 SF3A3Q12874 501 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 NLRP9Q7RTR0 991 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 VCPIP1Q96JH7 1222 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 NEUROG2Q9H2A3 272 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 SNX12Q9UMY4 172 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 TLL1O43897 1013 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CLASP2O75122 1294 aaKnown RBP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CDH16O75309 829 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CYP2A6P11509 494 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 BEX3Q00994 111 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 PPARDQ03181 441 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 AMHR2Q16671 573 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 ABRAQ8N0Z2 381 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 ELMO2Q96JJ3 720 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 WDR41Q9HAD4 459 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 TBC1D13Q9NVG8 400 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CHCHD3Q9NX63 227 aaKnown RBP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CD274Q9NZQ7 290 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 VPS26AO75436 327 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CHRM3P20309 590 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 DUSP28Q4G0W2 176 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 FIGNQ5HY92 759 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 LRRC43Q8N309 656 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 RIBC1Q8N443 379 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 GBP5Q96PP8 586 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CBWD1Q9BRT8 395 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CARD9Q9H257 536 aa10.23□□□□□ -0.77
SCAF11-202ENST00000369367 ACTR5Q9H9F9 607 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-202ENST00000369367 CYP11B1P15538 503 aa10.22□□□□□ -0.77
SCAF11-202ENST00000369367 PDCLQ13371 301 aa10.22□□□□□ -0.77
SCAF11-202ENST00000369367 KDELC2Q7Z4H8 507 aa10.22□□□□□ -0.77
SCAF11-202ENST00000369367 SNX31Q8N9S9 440 aa10.22□□□□□ -0.77
SCAF11-202ENST00000369367 IFRD1O00458 451 aaPredicted RBP10.22□□□□□ -0.77
SCAF11-202ENST00000369367 SERPINB4P48594 390 aa10.22□□□□□ -0.77
SCAF11-202ENST00000369367 GTF2A1P52655 376 aaPredicted RBP10.22□□□□□ -0.77
SCAF11-202ENST00000369367 C1QBPQ07021 282 aaKnown RBP10.22□□□□□ -0.77
SCAF11-202ENST00000369367 CCDC126Q96EE4 140 aa10.22□□□□□ -0.77
SCAF11-202ENST00000369367 SLC4A9Q96Q91 983 aa10.22□□□□□ -0.77
SCAF11-202ENST00000369367 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms