RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GOLGA2P5Q9HBQ8 144 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 TBC1D23Q9NUY8 699 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 HESX1Q9UBX0 185 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 MID2Q9UJV3 735 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 HDAC9Q9UKV0 1011 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 CPDO75976 1380 aa6.65□□□□□ -1.35
RNU4-39P-201ENST00000362455 RAB3GAP2Q9H2M9 1393 aa6.65□□□□□ -1.35
RNU4-39P-201ENST00000362455 RGPD8O14715 1765 aaPredicted RBP6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 COL14A1Q05707 1796 aaKnown RBP6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 CCDC189A1A4V9 331 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 CAPN14A8MX76 684 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 LEFTY2O00292 366 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 POLRMTO00411 1230 aaKnown RBP6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 AREL1O15033 823 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 PLSCR1O15162 318 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 FFAR2O15552 330 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 ALDH9A1P49189 494 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 NHLH2Q02577 135 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 HHEXQ03014 270 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 RAPGEF1Q13905 1077 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 PUM3Q15397 648 aaKnown RBP6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 TMEM95Q3KNT9 176 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 FAM102AQ5T9C2 384 aaPredicted RBP6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 TSHZ3Q63HK5 1081 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZDHHC24Q6UX98 284 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 SGMS1Q86VZ5 419 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 CIR1Q86X95 450 aaPredicted RBP6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 YAF2Q8IY57 180 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 GSPT2Q8IYD1 628 aaKnown RBP6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 IPCEF1Q8WWN9 437 aaPredicted RBP6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 PPM1EQ8WY54 764 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 C18orf8Q96DM3 657 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 LRRC46Q96FV0 321 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 SMOQ99835 787 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 ETAA1Q9NY74 926 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 VSX1Q9NZR4 365 aaPredicted RBP6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 SLC39A10Q9ULF5 831 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 TBC1D30Q9Y2I9 924 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 EIF3AQ14152 1382 aaKnown RBP6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 ADAMTS20P59510 1910 aa6.64□□□□□ -1.35
RNU4-39P-201ENST00000362455 hCG_1642624A0A1W2PR95 340 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 OTOL1A6NHN0 477 aaPredicted RBP6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 MYL4P12829 197 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 IL1R2P27930 398 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 VIPR2P41587 438 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 WNT3P56703 355 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 PIGFQ07326 219 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 BLMHQ13867 455 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 BOP1Q14137 746 aaKnown RBP6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 CCDC38Q502W7 563 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 HSP90AB4PQ58FF6 505 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 AGAP9Q5VTM2 703 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 NAIF1Q69YI7 327 aaPredicted RBP6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 TAPT1Q6NXT6 567 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 RHOT2Q8IXI1 618 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 NSUN7Q8NE18 718 aaKnown RBP6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 SLC46A1Q96NT5 459 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 TRIB1Q96RU8 372 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 MNTQ99583 582 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 TTYH3Q9C0H2 523 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 XYLT2Q9H1B5 865 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 TNS1Q9HBL0 1735 aaKnown RBP6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 LUZP4Q9P127 313 aa6.63□□□□□ -1.35
RNU4-39P-201ENST00000362455 CRYBG1Q9Y4K1 1723 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 COL5A2P05997 1499 aaPredicted RBP6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 NINLQ9Y2I6 1382 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 CCDC78A2IDD5 438 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 DCLK1O15075 740 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 NDST3O95803 873 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 A1BGP04217 495 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 XRCC6P12956 609 aaKnown RBP eCLIP6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 CHRM3P20309 590 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 PDIA3P30101 505 aaKnown RBP6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 APOBEC3AP31941 199 aaPredicted RBP6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 GRK6P43250 576 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 TOB1P50616 345 aaPredicted RBP6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZNF844Q08AG5 666 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 GRM1Q13255 1194 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 UBXN11Q5T124 520 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZFYVE27Q5T4F4 411 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 TLDC1Q6P9B6 456 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 GLB1LQ6UWU2 654 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 SLC30A10Q6XR72 485 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 SPOCD1Q6ZMY3 1216 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 Q6ZRM9 215 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 HTR3DQ70Z44 454 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZNF808Q8N4W9 903 aaPredicted RBP6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 MYCT1Q8N699 235 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 VGLL2Q8N8G2 317 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 PSD4Q8NDX1 1056 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 OR56A1Q8NGH5 318 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 CCT6BQ92526 530 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 MUL1Q969V5 352 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 EVI5LQ96CN4 794 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 LRIG1Q96JA1 1093 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 MOGAT1Q96PD6 335 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 PNKPQ96T60 521 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 GDF15Q99988 308 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 HEPHQ9BQS7 1158 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms