RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 ATG16L1Q676U5 607 aa18.61■□□□□ 0.57
APP-202ENST00000348990 IGDCC3Q8IVU1 814 aa18.61■□□□□ 0.57
APP-202ENST00000348990 FAF2Q96CS3 445 aa18.61■□□□□ 0.57
APP-202ENST00000348990 ZBTB45Q96K62 511 aaPredicted RBP18.61■□□□□ 0.57
APP-202ENST00000348990 MMADHCQ9H3L0 296 aaPredicted RBP18.61■□□□□ 0.57
APP-202ENST00000348990 TAGLN3Q9UI15 199 aa18.61■□□□□ 0.57
APP-202ENST00000348990 AGO2Q9UKV8 859 aaKnown RBP18.61■□□□□ 0.57
APP-202ENST00000348990 LOC100653049A0A140TA62 436 aa18.6■□□□□ 0.57
APP-202ENST00000348990 LRRIQ4A6NIV6 560 aa18.6■□□□□ 0.57
APP-202ENST00000348990 KRT34O76011 436 aa18.6■□□□□ 0.57
APP-202ENST00000348990 ITGAVP06756 1048 aa18.6■□□□□ 0.57
APP-202ENST00000348990 SNRPFP62306 86 aaKnown RBP18.6■□□□□ 0.57
APP-202ENST00000348990 KRT72Q14CN4 511 aa18.6■□□□□ 0.57
APP-202ENST00000348990 EMC1Q8N766 993 aa18.6■□□□□ 0.57
APP-202ENST00000348990 CERKQ8TCT0 537 aa18.6■□□□□ 0.57
APP-202ENST00000348990 RBAKQ9NYW8 714 aaPredicted RBP18.6■□□□□ 0.57
APP-202ENST00000348990 CLIC5Q9NZA1 410 aa18.6■□□□□ 0.57
APP-202ENST00000348990 TMEM191CA6NGB0 347 aa18.6■□□□□ 0.57
APP-202ENST00000348990 MCF2LO15068 1137 aa18.6■□□□□ 0.57
APP-202ENST00000348990 KRT37O76014 449 aa18.6■□□□□ 0.57
APP-202ENST00000348990 TMEM191BP0C7N4 346 aa18.6■□□□□ 0.57
APP-202ENST00000348990 CCNFP41002 786 aa18.6■□□□□ 0.57
APP-202ENST00000348990 OGDHQ02218 1023 aa18.6■□□□□ 0.57
APP-202ENST00000348990 C1QBPQ07021 282 aaKnown RBP18.6■□□□□ 0.57
APP-202ENST00000348990 MMEL1Q495T6 779 aa18.6■□□□□ 0.57
APP-202ENST00000348990 RAPH1Q70E73 1250 aa18.6■□□□□ 0.57
APP-202ENST00000348990 LARGE2Q8N3Y3 721 aa18.6■□□□□ 0.57
APP-202ENST00000348990 OPTNQ96CV9 577 aa18.6■□□□□ 0.57
APP-202ENST00000348990 NR1H4Q96RI1 486 aaPredicted RBP18.6■□□□□ 0.57
APP-202ENST00000348990 SPATA16Q9BXB7 569 aa18.6■□□□□ 0.57
APP-202ENST00000348990 APOBEC3GQ9HC16 384 aaKnown RBP18.6■□□□□ 0.57
APP-202ENST00000348990 SNCAIPQ9Y6H5 919 aa18.6■□□□□ 0.57
APP-202ENST00000348990 A6NJR5 290 aa18.59■□□□□ 0.57
APP-202ENST00000348990 NDC80O14777 642 aa18.59■□□□□ 0.57
APP-202ENST00000348990 CDKN2BP42772 138 aa18.59■□□□□ 0.57
APP-202ENST00000348990 TRIP10Q15642 601 aa18.59■□□□□ 0.57
APP-202ENST00000348990 GSTA3Q16772 222 aa18.59■□□□□ 0.57
APP-202ENST00000348990 MTERF2Q49AM1 385 aa18.59■□□□□ 0.57
APP-202ENST00000348990 CDHR3Q6ZTQ4 885 aa18.59■□□□□ 0.57
APP-202ENST00000348990 HIC2Q96JB3 615 aa18.59■□□□□ 0.57
APP-202ENST00000348990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.59■□□□□ 0.57
APP-202ENST00000348990 WDR64B1ANS9 1081 aa18.59■□□□□ 0.57
APP-202ENST00000348990 DHX15O43143 795 aaKnown RBP18.59■□□□□ 0.57
APP-202ENST00000348990 RNASEH1O60930 286 aaKnown RBP18.59■□□□□ 0.57
APP-202ENST00000348990 PGM3O95394 542 aa18.59■□□□□ 0.57
APP-202ENST00000348990 DEUP1Q05D60 604 aa18.59■□□□□ 0.57
APP-202ENST00000348990 RABGAP1LQ5R372 815 aa18.59■□□□□ 0.57
APP-202ENST00000348990 MROH9Q5TGP6 573 aa18.59■□□□□ 0.57
APP-202ENST00000348990 GPAT2Q6NUI2 795 aa18.59■□□□□ 0.57
APP-202ENST00000348990 PPP2R3CQ969Q6 453 aa18.59■□□□□ 0.57
APP-202ENST00000348990 RAVER2Q9HCJ3 691 aaKnown RBP18.59■□□□□ 0.57
APP-202ENST00000348990 NUB1Q9Y5A7 615 aa18.59■□□□□ 0.57
APP-202ENST00000348990 CALB1P05937 261 aa18.59■□□□□ 0.57
APP-202ENST00000348990 CD48P09326 243 aa18.59■□□□□ 0.57
APP-202ENST00000348990 C6orf222P0C671 652 aaPredicted RBP18.59■□□□□ 0.57
APP-202ENST00000348990 WNT7BP56706 349 aa18.59■□□□□ 0.57
APP-202ENST00000348990 MAP7Q14244 749 aa18.59■□□□□ 0.57
APP-202ENST00000348990 HADHQ16836 314 aaKnown RBP18.59■□□□□ 0.57
APP-202ENST00000348990 DNAL1Q4LDG9 190 aa18.59■□□□□ 0.57
APP-202ENST00000348990 ZNF276Q8N554 614 aa18.59■□□□□ 0.57
APP-202ENST00000348990 TMEM35BQ8NCS4 154 aa18.59■□□□□ 0.57
APP-202ENST00000348990 SPATA18Q8TC71 538 aa18.59■□□□□ 0.57
APP-202ENST00000348990 LRRN4Q8WUT4 740 aa18.59■□□□□ 0.57
APP-202ENST00000348990 TAAR1Q96RJ0 339 aa18.59■□□□□ 0.57
APP-202ENST00000348990 SSU72Q9NP77 194 aaKnown RBP18.59■□□□□ 0.57
APP-202ENST00000348990 TBC1D22BQ9NU19 505 aa18.59■□□□□ 0.57
APP-202ENST00000348990 TNRC6CQ9HCJ0 1690 aaKnown RBP18.59■□□□□ 0.57
APP-202ENST00000348990 TM7SF2O76062 418 aa18.58■□□□□ 0.57
APP-202ENST00000348990 LGSNQ5TDP6 509 aa18.58■□□□□ 0.57
APP-202ENST00000348990 SWSAP1Q6NVH7 229 aa18.58■□□□□ 0.57
APP-202ENST00000348990 ANO5Q75V66 913 aa18.58■□□□□ 0.57
APP-202ENST00000348990 NET1Q7Z628 596 aaPredicted RBP18.58■□□□□ 0.57
APP-202ENST00000348990 RSPH3Q86UC2 560 aa18.58■□□□□ 0.57
APP-202ENST00000348990 PHF13Q86YI8 300 aaPredicted RBP18.58■□□□□ 0.57
APP-202ENST00000348990 FAM81AQ8TBF8 368 aa18.58■□□□□ 0.57
APP-202ENST00000348990 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.58■□□□□ 0.57
APP-202ENST00000348990 NKD2Q969F2 451 aaPredicted RBP18.58■□□□□ 0.57
APP-202ENST00000348990 GLIS2Q9BZE0 524 aaPredicted RBP18.58■□□□□ 0.57
APP-202ENST00000348990 DNAJC6O75061 913 aa18.58■□□□□ 0.56
APP-202ENST00000348990 ZC3H11AO75152 810 aaKnown RBP eCLIP18.58■□□□□ 0.56
APP-202ENST00000348990 ZACNQ401N2 412 aa18.58■□□□□ 0.56
APP-202ENST00000348990 NDUFAF2Q8N183 169 aa18.58■□□□□ 0.56
APP-202ENST00000348990 PRMT6Q96LA8 375 aaPredicted RBP18.58■□□□□ 0.56
APP-202ENST00000348990 RAB6BQ9NRW1 208 aa18.58■□□□□ 0.56
APP-202ENST00000348990 DDX56Q9NY93 547 aaKnown RBP18.58■□□□□ 0.56
APP-202ENST00000348990 ZNRF3Q9ULT6 936 aa18.58■□□□□ 0.56
APP-202ENST00000348990 NCF2P19878 526 aaPredicted RBP18.58■□□□□ 0.56
APP-202ENST00000348990 HIRAP54198 1017 aaPredicted RBP18.58■□□□□ 0.56
APP-202ENST00000348990 C1orf228Q6PIY5 440 aa18.58■□□□□ 0.56
APP-202ENST00000348990 B3GNT9Q6UX72 402 aa18.58■□□□□ 0.56
APP-202ENST00000348990 MARK2Q7KZI7 788 aaKnown RBP18.58■□□□□ 0.56
APP-202ENST00000348990 SHKBP1Q8TBC3 707 aa18.58■□□□□ 0.56
APP-202ENST00000348990 IFT43Q96FT9 208 aa18.58■□□□□ 0.56
APP-202ENST00000348990 VCPIP1Q96JH7 1222 aa18.58■□□□□ 0.56
APP-202ENST00000348990 EBF4Q9BQW3 602 aa18.58■□□□□ 0.56
APP-202ENST00000348990 STRIP2Q9ULQ0 834 aa18.58■□□□□ 0.56
APP-202ENST00000348990 COL14A1Q05707 1796 aaKnown RBP18.57■□□□□ 0.56
APP-202ENST00000348990 HSPA1LP34931 641 aa18.57■□□□□ 0.56
APP-202ENST00000348990 NCOA4Q13772 614 aa18.57■□□□□ 0.56
APP-202ENST00000348990 PIGHQ14442 188 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms